Protein–RNA interactions for Protein: Q9H4D5

NXF3, Nuclear RNA export factor 3, humanhuman

Known RBP Predictions only

Length 531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NXF3Q9H4D5 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 LINC01126-201ENST00000623515 1646 ntBASIC19.8■□□□□ 0.76
NXF3Q9H4D5 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 AC104819.1-201ENST00000504587 486 ntBASIC19.8■□□□□ 0.76
NXF3Q9H4D5 UNC93B7-201ENST00000509439 705 ntBASIC19.8■□□□□ 0.76
NXF3Q9H4D5 AC074051.2-201ENST00000565115 352 ntBASIC19.8■□□□□ 0.76
NXF3Q9H4D5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 AL732292.2-201ENST00000609649 430 ntBASIC19.8■□□□□ 0.76
NXF3Q9H4D5 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC19.8■□□□□ 0.76
NXF3Q9H4D5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 CROCCP3-202ENST00000420820 1947 ntBASIC19.8■□□□□ 0.76
NXF3Q9H4D5 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
NXF3Q9H4D5 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 LYSMD4-202ENST00000344791 2885 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 AC113404.2-201ENST00000507884 177 ntBASIC19.79■□□□□ 0.76
NXF3Q9H4D5 FOSL1P1-201ENST00000511041 816 ntBASIC19.79■□□□□ 0.76
NXF3Q9H4D5 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 AC126763.1-201ENST00000552015 2118 ntBASIC19.79■□□□□ 0.76
NXF3Q9H4D5 AP000974.1-201ENST00000623909 2387 ntBASIC19.79■□□□□ 0.76
NXF3Q9H4D5 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
NXF3Q9H4D5 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
NXF3Q9H4D5 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 KRT17P6-201ENST00000453795 1220 ntBASIC19.77■□□□□ 0.76
NXF3Q9H4D5 RN7SL510P-201ENST00000581311 263 ntBASIC19.77■□□□□ 0.76
NXF3Q9H4D5 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 Z69720.1-201ENST00000601483 472 ntBASIC19.77■□□□□ 0.76
NXF3Q9H4D5 AC138894.3-201ENST00000603787 634 ntBASIC19.77■□□□□ 0.76
NXF3Q9H4D5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
NXF3Q9H4D5 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
NXF3Q9H4D5 PIP5K1C-201ENST00000335312 5080 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 63.2 ms