Protein–RNA interactions for Protein: Q9H1C7

CYSTM1, Cysteine-rich and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 97 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1Q9H1C7 LHX1-201ENST00000614239 3425 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 SNX14-202ENST00000346348 3348 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 ATP6V1B2-201ENST00000276390 2875 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 LDLR-204ENST00000545707 2429 ntTSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 AC010327.5-201ENST00000586923 3061 ntBASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 KCNJ12-201ENST00000331718 2198 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 ZNF713-202ENST00000429591 4339 ntAPPRIS P2 TSL 5 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 FAM136A-202ENST00000430566 885 ntTSL 3 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 LINC00841-201ENST00000451929 2126 ntTSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 GFM1-208ENST00000478576 2147 ntTSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 AC009133.5-201ENST00000562594 473 ntTSL 4 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 AP002365.1-201ENST00000603448 772 ntBASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 SMYD2-201ENST00000366957 1671 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 SULT1C4-201ENST00000272452 1860 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 RBPMS-202ENST00000320203 3110 ntAPPRIS P3 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 LRCH1-202ENST00000389797 3314 ntAPPRIS ALT2 TSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 PLEKHJ1-211ENST00000589097 2251 ntAPPRIS P1 TSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 NTRK3-AS1-201ENST00000569588 2663 ntTSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 MRPL4-207ENST00000590669 1423 ntTSL 1 (best) BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC10.65□□□□□ -0.7
CYSTM1Q9H1C7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC10.65□□□□□ -0.71
CYSTM1Q9H1C7 CYP2R1-201ENST00000334636 2235 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CYSTM1Q9H1C7 GIT2-220ENST00000553118 2424 ntTSL 5 BASIC10.65□□□□□ -0.71
CYSTM1Q9H1C7 CHRNB4-201ENST00000261751 2623 ntAPPRIS P1 TSL 1 (best) BASIC10.65□□□□□ -0.71
CYSTM1Q9H1C7 SGPP2-201ENST00000321276 3336 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 ARRDC4-201ENST00000268042 4072 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 CNOT9-208ENST00000542068 3259 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 HMCN2-204ENST00000611173 1920 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 TSC22D1-211ENST00000501704 4026 ntTSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 NAALADL1-204ENST00000358658 2699 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 SYNRG-225ENST00000619541 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 FAM83A-202ENST00000518448 5393 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 AC026202.3-201ENST00000600805 1127 ntBASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 PPM1M-202ENST00000323588 2193 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 GRSF1-208ENST00000545193 2682 ntTSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 PML-217ENST00000567543 1404 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 AC118758.2-201ENST00000614242 2813 ntBASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 AC073347.1-201ENST00000421633 2643 ntBASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 RALGDS-202ENST00000372050 3634 ntAPPRIS P3 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 COLGALT2-201ENST00000361927 5177 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 STX18-205ENST00000505286 1380 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 SLC9A3-AS1-207ENST00000607286 1357 ntTSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 CDH1-202ENST00000422392 2567 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 KIAA1211-203ENST00000504228 4628 ntAPPRIS P2 TSL 5 BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC10.64□□□□□ -0.71
CYSTM1Q9H1C7 KCNK4-TEX40-201ENST00000539086 2733 ntTSL 1 (best) BASIC10.64□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms