Protein–RNA interactions for Protein: Q9GZS1

POLR1E, DNA-directed RNA polymerase I subunit RPA49, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1EQ9GZS1 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 REEP1-209ENST00000541910 969 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
POLR1EQ9GZS1 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 PAX3-201ENST00000258387 958 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 MIEN1-201ENST00000394231 1006 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 DUX4L26-201ENST00000489078 1255 ntBASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 AC063952.2-201ENST00000498792 1227 ntBASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 PBK-203ENST00000522944 1499 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 AL162741.1-201ENST00000565563 1558 ntBASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.62■□□□□ 0.57
POLR1EQ9GZS1 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 LTBR-211ENST00000543190 785 ntTSL 3 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 LINC01238-205ENST00000567549 1107 ntBASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 BDKRB1-204ENST00000611804 1085 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
POLR1EQ9GZS1 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 AL359075.1-203ENST00000462729 1002 ntBASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 AC022616.7-201ENST00000525383 220 ntBASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 ESPNP-201ENST00000270691 2015 ntBASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
POLR1EQ9GZS1 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms