Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 ACE-202ENST00000290866 4959 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 PIF1-201ENST00000268043 2687 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 TNRC18P3-201ENST00000441896 2691 ntBASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 DCLK2-201ENST00000296550 4265 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 DTNB-209ENST00000407038 2294 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 AD000864.1-201ENST00000624076 2295 ntBASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 CYP2U1-202ENST00000508453 3125 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 CDIPT-210ENST00000570016 1346 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC4.97□□□□□ -1.61
LCE3DQ9BYE3 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 KLHL33-203ENST00000637228 5404 ntTSL 5 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC4.96□□□□□ -1.61
LCE3DQ9BYE3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 BX322557.1-202ENST00000400362 1460 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 AMZ1-201ENST00000312371 5516 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ELAVL2-208ENST00000544538 3789 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SCUBE2-202ENST00000450649 2912 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 TRIM14-201ENST00000341469 4454 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ELP1-201ENST00000374647 5905 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 NDUFS3-201ENST00000263774 958 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 JSRP1-201ENST00000300961 1138 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ACYP2-201ENST00000303536 789 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 CD58-201ENST00000369487 892 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 CD58-202ENST00000369489 1098 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ZNF292-204ENST00000392985 1096 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 MIR939-201ENST00000401314 82 ntBASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 APOBEC3H-202ENST00000401756 1023 ntAPPRIS ALT2 TSL 3 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 LINC01167-201ENST00000423232 604 ntTSL 3 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 PET117-201ENST00000432901 1141 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 TERF1P5-201ENST00000477545 1207 ntBASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 HES2-205ENST00000487437 968 ntTSL 3 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 NIFKP4-201ENST00000567275 1192 ntBASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 HAS1-203ENST00000594621 760 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 AC010999.2-201ENST00000621974 596 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 CCDC88C-203ENST00000389856 1641 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 CLDN9-201ENST00000445369 2050 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 TSPY26P-202ENST00000565928 3884 ntBASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 SORCS2-201ENST00000329016 5582 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 CDCA4-202ENST00000392590 1536 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 DMPK-201ENST00000291270 2787 ntAPPRIS P3 TSL 5 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
LCE3DQ9BYE3 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms