Protein–RNA interactions for Protein: Q9BY42

RTFDC1, Protein RTF2 homolog, humanhuman

Predicted RBP Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1Q9BY42 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 PARD3-213ENST00000545260 5740 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 RPS2P28-201ENST00000314255 741 ntBASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 CD63-204ENST00000546939 779 ntTSL 3 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC22.28■■□□□ 1.16
RTFDC1Q9BY42 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 AL161938.1-201ENST00000569833 2180 ntBASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 PAM16-208ENST00000573553 722 ntTSL 2 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC22.27■■□□□ 1.16
RTFDC1Q9BY42 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 AC125634.1-201ENST00000438758 1403 ntBASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 AP005117.1-201ENST00000584346 1413 ntBASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 RBSN-204ENST00000449050 903 ntTSL 2 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 AC021087.4-201ENST00000563761 564 ntBASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 AC009154.2-201ENST00000621177 724 ntBASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 AL024508.2-201ENST00000607749 1894 ntBASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
RTFDC1Q9BY42 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 FAM220CP-201ENST00000395253 831 ntBASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 MTCL1P1-201ENST00000446207 792 ntBASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 AL049812.1-201ENST00000432563 2267 ntBASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC22.25■■□□□ 1.15
RTFDC1Q9BY42 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 MIR940-201ENST00000401276 94 ntBASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 SLC25A3P1-206ENST00000569142 925 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 SDHAP2-201ENST00000455183 2001 ntBASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC22.24■■□□□ 1.15
RTFDC1Q9BY42 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC22.24■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 46.9 ms