Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 AP001363.2-201ENST00000538101 391 ntTSL 3 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 AL121906.2-201ENST00000621597 723 ntBASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 FNDC5-207ENST00000640867 639 ntAPPRIS P2 TSL 2 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 ZBTB16-202ENST00000392996 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 TMEM189-UBE2V1-201ENST00000341698 2757 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 GIT2-202ENST00000354574 5387 ntTSL 5 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 AC022211.2-201ENST00000585075 2527 ntBASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 NEO1-201ENST00000261908 7088 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC13.9□□□□□ -0.18
SSBP4Q9BWG4 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.19
SSBP4Q9BWG4 KLHDC9-201ENST00000368011 1314 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
SSBP4Q9BWG4 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 AC011676.5-201ENST00000624864 2660 ntBASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 GFOD1-203ENST00000379287 8751 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 USB1-201ENST00000219281 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 AL499627.1-201ENST00000569373 2188 ntBASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 FTCDNL1-204ENST00000622774 1997 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 TOM1L1-221ENST00000575882 2507 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 STAT5A-201ENST00000345506 4301 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 WIPF1-207ENST00000410117 777 ntTSL 3 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 TSPY21P-201ENST00000433481 731 ntBASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 TMEM191C-212ENST00000536718 480 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 MARS-234ENST00000630571 216 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 MARS-235ENST00000630803 183 ntTSL 3 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 ADGRB2-212ENST00000527361 4919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 NKILA-202ENST00000614771 2598 ntBASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 TMEFF2-201ENST00000272771 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC13.89□□□□□ -0.19
SSBP4Q9BWG4 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 GRAMD1A-211ENST00000599564 2825 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 FLYWCH1-203ENST00000416288 4963 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 TRIM72-201ENST00000322122 8500 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 FGFR2-215ENST00000457416 3061 ntAPPRIS P3 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 TERT-202ENST00000334602 3210 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 CHCHD10-201ENST00000401675 691 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 SERPINH1P1-201ENST00000419794 1249 ntBASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 TUBB8P6-201ENST00000436895 1288 ntBASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 OCIAD2-205ENST00000508632 1163 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 SAMD11-202ENST00000342066 2551 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 SAMD11-217ENST00000622503 2557 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 PP12613-201ENST00000424958 2230 ntBASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 P4HB-203ENST00000439918 1502 ntTSL 5 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 RAPSN-205ENST00000529341 1408 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
SSBP4Q9BWG4 UCHL5-204ENST00000367451 1346 ntTSL 5 BASIC13.88□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms