Protein–RNA interactions for Protein: Q9BT76

UPK3B, Uroplakin-3b, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3BQ9BT76 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
UPK3BQ9BT76 DCAF17-211ENST00000539783 5623 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 HOXB1-202ENST00000577092 1414 ntBASIC12.8□□□□□ -0.36
UPK3BQ9BT76 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 AL031133.1-201ENST00000406807 723 ntBASIC12.8□□□□□ -0.36
UPK3BQ9BT76 AL513320.1-201ENST00000435049 622 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 AL671277.2-201ENST00000458060 996 ntBASIC12.8□□□□□ -0.36
UPK3BQ9BT76 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 AC112497.1-201ENST00000624824 639 ntBASIC12.8□□□□□ -0.36
UPK3BQ9BT76 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC12.8□□□□□ -0.36
UPK3BQ9BT76 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 CHRNB2-201ENST00000368476 5867 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 AL359075.1-203ENST00000462729 1002 ntBASIC12.79□□□□□ -0.36
UPK3BQ9BT76 SNX5-210ENST00000481323 562 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 CLN6-204ENST00000564752 900 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 AC091076.1-201ENST00000610741 619 ntBASIC12.79□□□□□ -0.36
UPK3BQ9BT76 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
UPK3BQ9BT76 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 ARHGEF19-201ENST00000270747 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 AC034236.2-201ENST00000606662 1610 ntBASIC12.78□□□□□ -0.36
UPK3BQ9BT76 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 MIR564-202ENST00000385049 94 ntBASIC12.78□□□□□ -0.36
UPK3BQ9BT76 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 LY6E-213ENST00000522528 606 ntTSL 3 BASIC12.78□□□□□ -0.36
UPK3BQ9BT76 MIR3180-4-201ENST00000582223 153 ntBASIC12.78□□□□□ -0.36
UPK3BQ9BT76 AC068587.9-201ENST00000641814 219 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 36.4 ms