Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 CLK1-205ENST00000434813 2026 ntTSL 2 BASIC18.65■□□□□ 0.58
SEMA3CQ99985 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA3CQ99985 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA3CQ99985 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA3CQ99985 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA3CQ99985 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
SEMA3CQ99985 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA3CQ99985 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA3CQ99985 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
SEMA3CQ99985 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC18.65■□□□□ 0.58
SEMA3CQ99985 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SEMA3CQ99985 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
SEMA3CQ99985 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
SEMA3CQ99985 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SEMA3CQ99985 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.64■□□□□ 0.57
SEMA3CQ99985 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 ADK-206ENST00000541550 2222 ntTSL 2 BASIC18.64■□□□□ 0.57
SEMA3CQ99985 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 SPDYE15P-201ENST00000424157 909 ntBASIC18.64■□□□□ 0.57
SEMA3CQ99985 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
SEMA3CQ99985 DUX4L26-201ENST00000489078 1255 ntBASIC18.64■□□□□ 0.57
SEMA3CQ99985 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC18.64■□□□□ 0.57
SEMA3CQ99985 MED9-202ENST00000580462 565 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC18.64■□□□□ 0.57
SEMA3CQ99985 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
SEMA3CQ99985 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 C6orf48-206ENST00000375641 602 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 SNX5-210ENST00000481323 562 ntTSL 3 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.63■□□□□ 0.57
SEMA3CQ99985 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SEMA3CQ99985 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 STARP1-201ENST00000397973 869 ntBASIC18.62■□□□□ 0.57
SEMA3CQ99985 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 HOMER2P1-201ENST00000455653 964 ntBASIC18.62■□□□□ 0.57
SEMA3CQ99985 AC092647.4-201ENST00000457211 535 ntBASIC18.62■□□□□ 0.57
SEMA3CQ99985 AL359075.1-203ENST00000462729 1002 ntBASIC18.62■□□□□ 0.57
SEMA3CQ99985 AC063952.2-201ENST00000498792 1227 ntBASIC18.62■□□□□ 0.57
SEMA3CQ99985 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.62■□□□□ 0.57
SEMA3CQ99985 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
SEMA3CQ99985 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SEMA3CQ99985 PDE6B-202ENST00000429163 2120 ntTSL 2 BASIC18.61■□□□□ 0.57
SEMA3CQ99985 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.61■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms