Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 RPS27L-204ENST00000455271 923 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC19.07■□□□□ 0.64
CDCA3Q99618 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC19.07■□□□□ 0.64
CDCA3Q99618 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC19.07■□□□□ 0.64
CDCA3Q99618 AC105339.3-201ENST00000560043 636 ntBASIC19.07■□□□□ 0.64
CDCA3Q99618 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA3Q99618 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC19.07■□□□□ 0.64
CDCA3Q99618 AC010327.4-202ENST00000591484 748 ntBASIC19.07■□□□□ 0.64
CDCA3Q99618 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA3Q99618 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 FNDC11-204ENST00000615526 2954 ntAPPRIS P1 BASIC19.07■□□□□ 0.64
CDCA3Q99618 FAM171A2-201ENST00000293443 3160 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC19.07■□□□□ 0.64
CDCA3Q99618 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC19.07■□□□□ 0.64
CDCA3Q99618 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC19.07■□□□□ 0.64
CDCA3Q99618 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA3Q99618 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC19.06■□□□□ 0.64
CDCA3Q99618 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDCA3Q99618 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA3Q99618 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC19.06■□□□□ 0.64
CDCA3Q99618 LEFTY2-202ENST00000420304 2085 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA3Q99618 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA3Q99618 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.06■□□□□ 0.64
CDCA3Q99618 CD9-202ENST00000382515 1229 ntTSL 5 BASIC19.06■□□□□ 0.64
CDCA3Q99618 KRT18P65-201ENST00000439811 1286 ntBASIC19.06■□□□□ 0.64
CDCA3Q99618 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA3Q99618 RNA5SP416-201ENST00000516838 111 ntBASIC19.06■□□□□ 0.64
CDCA3Q99618 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA3Q99618 AC012640.2-201ENST00000561606 901 ntBASIC19.06■□□□□ 0.64
CDCA3Q99618 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA3Q99618 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.06■□□□□ 0.64
CDCA3Q99618 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.06■□□□□ 0.64
CDCA3Q99618 AC107918.4-202ENST00000641623 219 ntBASIC19.06■□□□□ 0.64
CDCA3Q99618 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.06■□□□□ 0.64
CDCA3Q99618 AC125437.2-201ENST00000625180 2167 ntBASIC19.06■□□□□ 0.64
CDCA3Q99618 CAMK1D-201ENST00000378845 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA3Q99618 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA3Q99618 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC19.06■□□□□ 0.64
CDCA3Q99618 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC19.06■□□□□ 0.64
CDCA3Q99618 OLIG2-202ENST00000382357 2578 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 TMPRSS5-212ENST00000545579 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.05■□□□□ 0.64
CDCA3Q99618 MSRA-206ENST00000521209 814 ntTSL 3 BASIC19.05■□□□□ 0.64
CDCA3Q99618 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC19.05■□□□□ 0.64
CDCA3Q99618 AL139424.1-201ENST00000607572 797 ntBASIC19.05■□□□□ 0.64
CDCA3Q99618 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 SDHAP2-201ENST00000455183 2001 ntBASIC19.05■□□□□ 0.64
CDCA3Q99618 KCNK7-204ENST00000394217 1372 ntTSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC19.05■□□□□ 0.64
CDCA3Q99618 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC19.05■□□□□ 0.64
CDCA3Q99618 SPATS2L-204ENST00000409140 2463 ntAPPRIS P1 TSL 2 BASIC19.05■□□□□ 0.64
CDCA3Q99618 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC19.05■□□□□ 0.64
CDCA3Q99618 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 CYP27A1-201ENST00000258415 2286 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 SERPINH1-215ENST00000533603 2299 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 TCP11-202ENST00000311875 2166 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.04■□□□□ 0.64
CDCA3Q99618 MOB1B-202ENST00000396051 1107 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 ANKRD54-202ENST00000406423 954 ntTSL 3 BASIC19.04■□□□□ 0.64
CDCA3Q99618 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 AC004967.1-201ENST00000453589 447 ntBASIC19.04■□□□□ 0.64
CDCA3Q99618 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC19.04■□□□□ 0.64
CDCA3Q99618 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC19.04■□□□□ 0.64
CDCA3Q99618 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.04■□□□□ 0.64
CDCA3Q99618 DHDH-204ENST00000523250 634 ntTSL 5 BASIC19.04■□□□□ 0.64
CDCA3Q99618 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC19.04■□□□□ 0.64
CDCA3Q99618 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
CDCA3Q99618 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC19.04■□□□□ 0.64
CDCA3Q99618 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
CDCA3Q99618 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.04■□□□□ 0.64
CDCA3Q99618 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
CDCA3Q99618 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC19.03■□□□□ 0.64
CDCA3Q99618 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC19.03■□□□□ 0.64
CDCA3Q99618 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.03■□□□□ 0.64
CDCA3Q99618 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
CDCA3Q99618 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms