Protein–RNA interactions for Protein: Q96S86

HAPLN3, Hyaluronan and proteoglycan link protein 3, humanhuman

Predictions only

Length 360 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HAPLN3Q96S86 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 GUK1-204ENST00000366721 689 ntTSL 3 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.01■□□□□ 0.63
HAPLN3Q96S86 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC19.01■□□□□ 0.63
HAPLN3Q96S86 AC079602.3-201ENST00000623931 403 ntBASIC19.01■□□□□ 0.63
HAPLN3Q96S86 AL590326.2-201ENST00000625139 305 ntBASIC19.01■□□□□ 0.63
HAPLN3Q96S86 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 RIMBP3C-202ENST00000433039 5784 ntAPPRIS P2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 AC090164.3-201ENST00000610780 2143 ntBASIC19.01■□□□□ 0.63
HAPLN3Q96S86 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC19.01■□□□□ 0.63
HAPLN3Q96S86 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC19■□□□□ 0.63
HAPLN3Q96S86 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19■□□□□ 0.63
HAPLN3Q96S86 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC19■□□□□ 0.63
HAPLN3Q96S86 HLA-F-220ENST00000434407 884 ntBASIC19■□□□□ 0.63
HAPLN3Q96S86 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 HYMAI.1-201ENST00000620949 238 ntBASIC19■□□□□ 0.63
HAPLN3Q96S86 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC19■□□□□ 0.63
HAPLN3Q96S86 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC19■□□□□ 0.63
HAPLN3Q96S86 MCCC1-215ENST00000629669 2316 ntTSL 5 BASIC19■□□□□ 0.63
HAPLN3Q96S86 HOXC11-201ENST00000243082 2039 ntTSL 3 BASIC19■□□□□ 0.63
HAPLN3Q96S86 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC19■□□□□ 0.63
HAPLN3Q96S86 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19■□□□□ 0.63
HAPLN3Q96S86 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 AL391807.1-203ENST00000604392 2365 ntBASIC18.99■□□□□ 0.63
HAPLN3Q96S86 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 MRPL24-202ENST00000368211 883 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 AC112907.2-201ENST00000448639 330 ntBASIC18.99■□□□□ 0.63
HAPLN3Q96S86 LY6E-213ENST00000522528 606 ntTSL 3 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 AL136038.4-201ENST00000603606 1261 ntBASIC18.99■□□□□ 0.63
HAPLN3Q96S86 FGF14-AS2-201ENST00000606448 1074 ntBASIC18.99■□□□□ 0.63
HAPLN3Q96S86 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 DFFB-212ENST00000625756 649 ntTSL 5 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 ZNF114-206ENST00000600687 1742 ntAPPRIS P1 TSL 5 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
HAPLN3Q96S86 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 COPE-203ENST00000351079 907 ntTSL 2 BASIC18.98■□□□□ 0.63
HAPLN3Q96S86 HBZP1-201ENST00000354915 429 ntBASIC18.98■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 39.4 ms