Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 NENF-201ENST00000366988 949 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 PPP1R14BP2-201ENST00000426284 444 ntBASIC14.92□□□□□ -0.02
RAB40CQ96S21 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 PNMA6B-201ENST00000538162 1200 ntBASIC14.92□□□□□ -0.02
RAB40CQ96S21 ANAPC11-219ENST00000583839 499 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 MAGIX-202ENST00000595224 1238 ntAPPRIS P2 TSL 5 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 AC104771.1-201ENST00000603335 964 ntBASIC14.92□□□□□ -0.02
RAB40CQ96S21 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 RIF1-204ENST00000430328 7992 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC14.92□□□□□ -0.02
RAB40CQ96S21 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
RAB40CQ96S21 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 POU5F1P3-201ENST00000428824 1078 ntBASIC14.91□□□□□ -0.02
RAB40CQ96S21 GATS-209ENST00000454084 1030 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 AC097658.1-201ENST00000475555 843 ntBASIC14.91□□□□□ -0.02
RAB40CQ96S21 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 AL138781.1-201ENST00000566567 1274 ntBASIC14.91□□□□□ -0.02
RAB40CQ96S21 AC060766.5-201ENST00000590539 871 ntBASIC14.91□□□□□ -0.02
RAB40CQ96S21 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 CD24-202ENST00000610952 802 ntAPPRIS P3 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 GAMT-205ENST00000640762 751 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 SLC30A2-202ENST00000374278 3097 ntTSL 1 (best) BASIC14.91□□□□□ -0.02
RAB40CQ96S21 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 HOTAIR-201ENST00000424518 2421 ntTSL 5 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC14.91□□□□□ -0.02
RAB40CQ96S21 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 HLA-DQB1-201ENST00000374943 1656 ntBASIC14.9□□□□□ -0.02
RAB40CQ96S21 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 CLIC6-201ENST00000349499 3806 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 SLC29A4P2-201ENST00000504749 1089 ntBASIC14.9□□□□□ -0.02
RAB40CQ96S21 PRSS44-201ENST00000515154 1146 ntBASIC14.9□□□□□ -0.02
RAB40CQ96S21 KRT18P41-201ENST00000518924 1277 ntBASIC14.9□□□□□ -0.02
RAB40CQ96S21 BET1L-207ENST00000529614 560 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 TP53I11-215ENST00000531928 1078 ntTSL 3 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 AC007216.1-201ENST00000570197 601 ntTSL 4 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 HTR7P1-201ENST00000538670 1336 ntBASIC14.9□□□□□ -0.02
RAB40CQ96S21 MTCL1-205ENST00000517570 6009 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC14.9□□□□□ -0.02
RAB40CQ96S21 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
RAB40CQ96S21 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
RAB40CQ96S21 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC14.89□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.9 ms