Protein–RNA interactions for Protein: Q96PS6

GAFA1, Putative uncharacterized protein GAFA-1, humanhuman

Predictions only

Length 74 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAFA1Q96PS6 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 AL049597.2-201ENST00000565575 961 ntBASIC15.28■□□□□ 0.04
GAFA1Q96PS6 LINC01238-205ENST00000567549 1107 ntBASIC15.28■□□□□ 0.04
GAFA1Q96PS6 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 MADD-208ENST00000405573 1823 ntTSL 5 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
GAFA1Q96PS6 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 ESPNP-201ENST00000270691 2015 ntBASIC15.27■□□□□ 0.04
GAFA1Q96PS6 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 PTCRA-201ENST00000304672 1080 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 AC105935.2-201ENST00000435478 544 ntTSL 4 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 PTCRA-202ENST00000441198 1005 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 PTCRA-203ENST00000446507 759 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 AC112907.2-201ENST00000448639 330 ntBASIC15.27■□□□□ 0.04
GAFA1Q96PS6 AC092597.1-201ENST00000487352 616 ntBASIC15.27■□□□□ 0.04
GAFA1Q96PS6 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 AL136038.4-201ENST00000603606 1261 ntBASIC15.27■□□□□ 0.04
GAFA1Q96PS6 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
GAFA1Q96PS6 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 AL391807.1-203ENST00000604392 2365 ntBASIC15.27■□□□□ 0.03
GAFA1Q96PS6 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 AL024508.2-201ENST00000607749 1894 ntBASIC15.27■□□□□ 0.03
GAFA1Q96PS6 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 PON1-201ENST00000222381 2568 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.03
GAFA1Q96PS6 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 VOPP1-201ENST00000285279 2962 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 AC020763.4-201ENST00000623414 4170 ntBASIC15.26■□□□□ 0.03
GAFA1Q96PS6 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 COPE-203ENST00000351079 907 ntTSL 2 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 AL162741.1-201ENST00000565563 1558 ntBASIC15.26■□□□□ 0.03
GAFA1Q96PS6 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.26■□□□□ 0.03
GAFA1Q96PS6 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
GAFA1Q96PS6 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC15.25■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms