Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX27Q96L92 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
SNX27Q96L92 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX27Q96L92 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC19.79■□□□□ 0.76
SNX27Q96L92 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 CCDC34-202ENST00000328697 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX27Q96L92 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC19.79■□□□□ 0.76
SNX27Q96L92 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
SNX27Q96L92 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
SNX27Q96L92 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX27Q96L92 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
SNX27Q96L92 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX27Q96L92 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX27Q96L92 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
SNX27Q96L92 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.78■□□□□ 0.76
SNX27Q96L92 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC19.78■□□□□ 0.76
SNX27Q96L92 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC19.78■□□□□ 0.76
SNX27Q96L92 MCC-208ENST00000514701 2855 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX27Q96L92 ESYT2-201ENST00000251527 5960 ntAPPRIS P2 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 C5orf47-201ENST00000340147 2522 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.78■□□□□ 0.76
SNX27Q96L92 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
SNX27Q96L92 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC19.78■□□□□ 0.76
SNX27Q96L92 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC19.78■□□□□ 0.76
SNX27Q96L92 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SNX27Q96L92 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX27Q96L92 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX27Q96L92 AL845331.1-201ENST00000424978 1190 ntBASIC19.77■□□□□ 0.76
SNX27Q96L92 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX27Q96L92 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX27Q96L92 AC126763.1-201ENST00000552015 2118 ntBASIC19.77■□□□□ 0.76
SNX27Q96L92 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC19.77■□□□□ 0.76
SNX27Q96L92 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC19.77■□□□□ 0.76
SNX27Q96L92 AL353692.3-201ENST00000407031 1396 ntBASIC19.77■□□□□ 0.76
SNX27Q96L92 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC19.77■□□□□ 0.76
SNX27Q96L92 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.77■□□□□ 0.76
SNX27Q96L92 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC19.77■□□□□ 0.76
SNX27Q96L92 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNX27Q96L92 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNX27Q96L92 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNX27Q96L92 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.77■□□□□ 0.75
SNX27Q96L92 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX27Q96L92 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX27Q96L92 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX27Q96L92 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX27Q96L92 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC19.76■□□□□ 0.75
SNX27Q96L92 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC19.76■□□□□ 0.75
SNX27Q96L92 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.76■□□□□ 0.75
SNX27Q96L92 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNX27Q96L92 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
SNX27Q96L92 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.76■□□□□ 0.75
SNX27Q96L92 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC19.76■□□□□ 0.75
SNX27Q96L92 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.76■□□□□ 0.75
SNX27Q96L92 AC008687.5-201ENST00000593746 558 ntBASIC19.76■□□□□ 0.75
SNX27Q96L92 AC092329.2-201ENST00000598402 547 ntBASIC19.76■□□□□ 0.75
SNX27Q96L92 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC19.76■□□□□ 0.75
SNX27Q96L92 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC19.76■□□□□ 0.75
SNX27Q96L92 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 64.8 ms