Protein–RNA interactions for Protein: Q96L08

SUSD3, Sushi domain-containing protein 3, humanhuman

Predictions only

Length 255 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3Q96L08 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 KRT18P31-201ENST00000506277 1292 ntBASIC19.41■□□□□ 0.7
SUSD3Q96L08 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 CDV3-207ENST00000508481 661 ntTSL 3 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 AP000721.2-201ENST00000537170 650 ntTSL 4 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 AC091304.2-201ENST00000564639 760 ntBASIC19.41■□□□□ 0.7
SUSD3Q96L08 AC022150.1-201ENST00000599222 640 ntTSL 3 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 AC099336.1-202ENST00000602961 463 ntBASIC19.41■□□□□ 0.7
SUSD3Q96L08 IFNL4P1-201ENST00000607083 540 ntBASIC19.41■□□□□ 0.7
SUSD3Q96L08 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC19.41■□□□□ 0.7
SUSD3Q96L08 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SUSD3Q96L08 CROCCP3-202ENST00000420820 1947 ntBASIC19.41■□□□□ 0.7
SUSD3Q96L08 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 BEX4-201ENST00000372691 1066 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 AC138894.3-201ENST00000603787 634 ntBASIC19.4■□□□□ 0.7
SUSD3Q96L08 PTENP1-AS-201ENST00000627688 873 ntTSL 5 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.4■□□□□ 0.7
SUSD3Q96L08 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SUSD3Q96L08 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.7
SUSD3Q96L08 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 AC004870.1-201ENST00000315132 882 ntBASIC19.39■□□□□ 0.69
SUSD3Q96L08 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 AC026396.1-201ENST00000419388 421 ntBASIC19.39■□□□□ 0.69
SUSD3Q96L08 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 CSF3-206ENST00000577675 1360 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SUSD3Q96L08 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
SUSD3Q96L08 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SUSD3Q96L08 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.38■□□□□ 0.69
SUSD3Q96L08 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SUSD3Q96L08 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.38■□□□□ 0.69
SUSD3Q96L08 AC068472.1-201ENST00000474589 881 ntBASIC19.38■□□□□ 0.69
SUSD3Q96L08 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC19.38■□□□□ 0.69
SUSD3Q96L08 MIMT1-202ENST00000599641 1290 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 AC009154.2-201ENST00000621177 724 ntBASIC19.38■□□□□ 0.69
SUSD3Q96L08 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SUSD3Q96L08 DMRT2-201ENST00000259622 2459 ntTSL 2 BASIC19.37■□□□□ 0.69
SUSD3Q96L08 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SUSD3Q96L08 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SUSD3Q96L08 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.37■□□□□ 0.69
SUSD3Q96L08 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms