Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
RNF31Q96EP0 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC17.72■□□□□ 0.43
RNF31Q96EP0 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 AL450487.1-201ENST00000426799 995 ntBASIC17.71■□□□□ 0.43
RNF31Q96EP0 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 SNHG7-203ENST00000436596 509 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 PP7080-204ENST00000510714 601 ntTSL 3 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 RNF126P1-202ENST00000569893 925 ntBASIC17.71■□□□□ 0.43
RNF31Q96EP0 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 AC011498.5-201ENST00000592027 486 ntBASIC17.71■□□□□ 0.43
RNF31Q96EP0 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
RNF31Q96EP0 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC17.71■□□□□ 0.43
RNF31Q96EP0 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.42
RNF31Q96EP0 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC17.71■□□□□ 0.42
RNF31Q96EP0 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.71■□□□□ 0.42
RNF31Q96EP0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 AC016734.2-201ENST00000624325 1377 ntBASIC17.7■□□□□ 0.42
RNF31Q96EP0 FP475955.4-201ENST00000623131 1990 ntBASIC17.7■□□□□ 0.42
RNF31Q96EP0 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 INS-201ENST00000250971 503 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 PPIH-202ENST00000372549 327 ntTSL 3 BASIC17.7■□□□□ 0.42
RNF31Q96EP0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 GRAMD4P1-201ENST00000435181 1110 ntBASIC17.7■□□□□ 0.42
RNF31Q96EP0 AL136038.4-201ENST00000603606 1261 ntBASIC17.7■□□□□ 0.42
RNF31Q96EP0 NPAP1P7-201ENST00000613027 823 ntBASIC17.7■□□□□ 0.42
RNF31Q96EP0 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.7■□□□□ 0.42
RNF31Q96EP0 SPACA6-213ENST00000637797 1073 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
RNF31Q96EP0 AL391807.1-203ENST00000604392 2365 ntBASIC17.7■□□□□ 0.42
RNF31Q96EP0 STRN3-202ENST00000357479 2799 ntAPPRIS P1 TSL 5 BASIC17.7■□□□□ 0.42
RNF31Q96EP0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF31Q96EP0 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.7■□□□□ 0.42
RNF31Q96EP0 AL162741.1-201ENST00000565563 1558 ntBASIC17.7■□□□□ 0.42
RNF31Q96EP0 FEM1AP3-201ENST00000403722 1741 ntBASIC17.69■□□□□ 0.42
RNF31Q96EP0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC17.69■□□□□ 0.42
RNF31Q96EP0 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
RNF31Q96EP0 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF31Q96EP0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF31Q96EP0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
RNF31Q96EP0 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF31Q96EP0 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC17.69■□□□□ 0.42
RNF31Q96EP0 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
RNF31Q96EP0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC17.69■□□□□ 0.42
RNF31Q96EP0 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC17.69■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 28.8 ms