Protein–RNA interactions for Protein: Q93096

PTP4A1, Protein tyrosine phosphatase type IVA 1, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1Q93096 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 AC008550.1-201ENST00000511500 884 ntBASIC16.53■□□□□ 0.24
PTP4A1Q93096 AL354712.1-201ENST00000563570 477 ntTSL 3 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC16.53■□□□□ 0.24
PTP4A1Q93096 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
PTP4A1Q93096 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 FLJ13224-201ENST00000313737 1514 ntBASIC16.52■□□□□ 0.24
PTP4A1Q93096 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 AL096828.2-201ENST00000567259 1965 ntBASIC16.52■□□□□ 0.24
PTP4A1Q93096 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 CXCL3-201ENST00000296026 1075 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 AL023284.2-201ENST00000405850 579 ntBASIC16.52■□□□□ 0.24
PTP4A1Q93096 FAM197Y1-201ENST00000421178 764 ntBASIC16.52■□□□□ 0.24
PTP4A1Q93096 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
PTP4A1Q93096 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 Z99916.2-201ENST00000604037 246 ntBASIC16.52■□□□□ 0.24
PTP4A1Q93096 CD177P1-201ENST00000606252 935 ntBASIC16.52■□□□□ 0.24
PTP4A1Q93096 AL049637.2-201ENST00000641778 930 ntBASIC16.52■□□□□ 0.24
PTP4A1Q93096 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC16.52■□□□□ 0.24
PTP4A1Q93096 HSDL1-202ENST00000434463 1493 ntTSL 2 BASIC16.52■□□□□ 0.23
PTP4A1Q93096 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 RUSC2-202ENST00000455600 5636 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.52■□□□□ 0.23
PTP4A1Q93096 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.52■□□□□ 0.23
PTP4A1Q93096 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.52■□□□□ 0.23
PTP4A1Q93096 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC16.52■□□□□ 0.23
PTP4A1Q93096 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
PTP4A1Q93096 MXRA8-202ENST00000342753 2231 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 SRI-203ENST00000419179 1307 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 SNCG-201ENST00000348795 684 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 AP000593.1-201ENST00000393668 712 ntBASIC16.51■□□□□ 0.23
PTP4A1Q93096 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 CCT7-215ENST00000539919 2031 ntTSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
PTP4A1Q93096 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
PTP4A1Q93096 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 GPAT2P1-201ENST00000444924 1672 ntBASIC16.5■□□□□ 0.23
PTP4A1Q93096 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 FSCN1P1-201ENST00000568912 1481 ntBASIC16.5■□□□□ 0.23
PTP4A1Q93096 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC16.5■□□□□ 0.23
PTP4A1Q93096 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
PTP4A1Q93096 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms