Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 FAM8A6P-201ENST00000407496 1135 ntBASIC19.58■□□□□ 0.72
DDX1Q92499 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.58■□□□□ 0.72
DDX1Q92499 AC007563.2-201ENST00000447289 552 ntTSL 5 BASIC19.58■□□□□ 0.72
DDX1Q92499 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 SEC1P-202ENST00000473944 940 ntBASIC19.58■□□□□ 0.72
DDX1Q92499 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX1Q92499 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX1Q92499 CLN6-204ENST00000564752 900 ntTSL 3 BASIC19.58■□□□□ 0.72
DDX1Q92499 KLK7-206ENST00000597707 1054 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
DDX1Q92499 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.58■□□□□ 0.72
DDX1Q92499 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC19.58■□□□□ 0.72
DDX1Q92499 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DDX1Q92499 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC19.58■□□□□ 0.72
DDX1Q92499 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DDX1Q92499 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC19.58■□□□□ 0.72
DDX1Q92499 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.58■□□□□ 0.72
DDX1Q92499 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC19.57■□□□□ 0.72
DDX1Q92499 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX1Q92499 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.57■□□□□ 0.72
DDX1Q92499 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC19.57■□□□□ 0.72
DDX1Q92499 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 LINC00421-201ENST00000413833 1054 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX1Q92499 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX1Q92499 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC19.57■□□□□ 0.72
DDX1Q92499 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 MIR3180-4-201ENST00000582223 153 ntBASIC19.57■□□□□ 0.72
DDX1Q92499 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 PHGDH-209ENST00000641074 1780 ntBASIC19.57■□□□□ 0.72
DDX1Q92499 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 GMCL1P1-201ENST00000463439 1581 ntBASIC19.57■□□□□ 0.72
DDX1Q92499 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DDX1Q92499 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.57■□□□□ 0.72
DDX1Q92499 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX1Q92499 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 KCNC4-203ENST00000413138 3018 ntAPPRIS ALT2 TSL 5 BASIC19.56■□□□□ 0.72
DDX1Q92499 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX1Q92499 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX1Q92499 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX1Q92499 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC19.56■□□□□ 0.72
DDX1Q92499 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX1Q92499 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.72
DDX1Q92499 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX1Q92499 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX1Q92499 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC19.56■□□□□ 0.72
DDX1Q92499 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC19.56■□□□□ 0.72
DDX1Q92499 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC19.56■□□□□ 0.72
DDX1Q92499 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC19.56■□□□□ 0.72
DDX1Q92499 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC19.56■□□□□ 0.72
DDX1Q92499 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DDX1Q92499 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX1Q92499 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX1Q92499 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX1Q92499 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC19.55■□□□□ 0.72
DDX1Q92499 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.55■□□□□ 0.72
DDX1Q92499 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DDX1Q92499 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX1Q92499 NOC2LP2-201ENST00000407594 1944 ntBASIC19.55■□□□□ 0.72
DDX1Q92499 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC19.55■□□□□ 0.72
DDX1Q92499 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC19.55■□□□□ 0.72
DDX1Q92499 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DDX1Q92499 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DDX1Q92499 NAP1L5-201ENST00000323061 2321 ntAPPRIS P1 BASIC19.55■□□□□ 0.72
DDX1Q92499 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC19.55■□□□□ 0.72
DDX1Q92499 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms