Protein–RNA interactions for Protein: Q8TEC5

SH3RF2, Putative E3 ubiquitin-protein ligase SH3RF2, humanhuman

Predictions only

Length 729 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF2Q8TEC5 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 UNC93B7-201ENST00000509439 705 ntBASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 AC012615.1-201ENST00000565797 1299 ntBASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 RN7SL510P-201ENST00000581311 263 ntBASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.04■□□□□ 0.64
SH3RF2Q8TEC5 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 AL353692.3-201ENST00000407031 1396 ntBASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 KRT89P-201ENST00000620027 1478 ntBASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.03■□□□□ 0.64
SH3RF2Q8TEC5 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 SNHG15-203ENST00000578968 982 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 AL592071.1-201ENST00000611956 408 ntBASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.02■□□□□ 0.64
SH3RF2Q8TEC5 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.02■□□□□ 0.63
SH3RF2Q8TEC5 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC19.02■□□□□ 0.63
SH3RF2Q8TEC5 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AL845331.1-201ENST00000424978 1190 ntBASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AC104819.1-201ENST00000504587 486 ntBASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 FOSL1P1-201ENST00000511041 816 ntBASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 GUSBP12-201ENST00000513727 720 ntBASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AL732292.2-201ENST00000609649 430 ntBASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AC124864.1-201ENST00000623408 392 ntBASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 AC233702.3-201ENST00000578656 1387 ntBASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
SH3RF2Q8TEC5 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 CACNG5-202ENST00000533854 1311 ntAPPRIS P1 TSL 2 BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 CROCCP3-202ENST00000420820 1947 ntBASIC19■□□□□ 0.63
SH3RF2Q8TEC5 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 AC099343.3-201ENST00000605834 2503 ntBASIC19■□□□□ 0.63
SH3RF2Q8TEC5 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19■□□□□ 0.63
SH3RF2Q8TEC5 MIR149-201ENST00000384879 89 ntBASIC19■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms