Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 DGCR10-201ENST00000609839 495 ntBASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 DECR2-212ENST00000627716 352 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 AL049637.2-201ENST00000641778 930 ntBASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC17.67■□□□□ 0.42
CLHC1Q8NHS4 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 GPR35-203ENST00000407714 1258 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 AC008764.6-201ENST00000595909 2069 ntBASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CLHC1Q8NHS4 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 NDUFA12-201ENST00000327772 635 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 AC012618.2-201ENST00000428058 849 ntBASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 MIR4674-201ENST00000582457 87 ntBASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 AC233702.5-201ENST00000584107 538 ntBASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 ALDH1A3-201ENST00000329841 3924 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CLHC1Q8NHS4 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 GABRB1-201ENST00000295454 2143 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 FUOM-203ENST00000368552 762 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 AL355355.2-201ENST00000442321 338 ntBASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 KRT18P41-201ENST00000518924 1277 ntBASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 MME-217ENST00000616757 1315 ntTSL 5 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.64■□□□□ 0.41
CLHC1Q8NHS4 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms