Protein–RNA interactions for Protein: Q8NHS1

CLDND2, Claudin domain-containing protein 2, humanhuman

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND2Q8NHS1 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 CLN6-214ENST00000636314 442 ntTSL 3 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CLDND2Q8NHS1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 PDLIM3-202ENST00000284770 1766 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 FXN-203ENST00000396366 922 ntTSL 2 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 GRAMD4P1-201ENST00000435181 1110 ntBASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 KRT18P56-201ENST00000507275 550 ntBASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 LCE1C-202ENST00000607093 644 ntAPPRIS P2 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 AC069148.1-201ENST00000608741 768 ntBASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 CA7-202ENST00000394069 1713 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
CLDND2Q8NHS1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 HBZP1-201ENST00000354915 429 ntBASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 AC003075.1-204ENST00000433005 540 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 AC092597.1-201ENST00000487352 616 ntBASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 SAR1B-208ENST00000507419 2287 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 RBM7-201ENST00000375490 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 RRN3-205ENST00000563559 2128 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CLDND2Q8NHS1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CLDND2Q8NHS1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms