Protein–RNA interactions for Protein: Q8NBN7

RDH13, Retinol dehydrogenase 13, humanhuman

Predictions only

Length 331 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RDH13Q8NBN7 AC011558.1-201ENST00000623459 338 ntBASIC20.13■□□□□ 0.81
RDH13Q8NBN7 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
RDH13Q8NBN7 HLA-G-205ENST00000428701 1578 ntAPPRIS P2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 PXK-206ENST00000463280 2825 ntTSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 AC007613.1-201ENST00000572811 2597 ntBASIC20.12■□□□□ 0.81
RDH13Q8NBN7 HS3ST3A1-201ENST00000284110 2527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 AC117947.1-201ENST00000427448 529 ntBASIC20.12■□□□□ 0.81
RDH13Q8NBN7 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 BX664615.1-201ENST00000443558 458 ntBASIC20.12■□□□□ 0.81
RDH13Q8NBN7 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 AL441883.1-201ENST00000566170 1045 ntBASIC20.12■□□□□ 0.81
RDH13Q8NBN7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 L3HYPDH-201ENST00000247194 1527 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
RDH13Q8NBN7 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 THOP1-205ENST00000586677 1872 ntTSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 RXRB-202ENST00000374685 2846 ntAPPRIS ALT1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 AC104076.2-201ENST00000448912 469 ntBASIC20.11■□□□□ 0.81
RDH13Q8NBN7 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 AC010240.3-201ENST00000607688 395 ntBASIC20.11■□□□□ 0.81
RDH13Q8NBN7 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 AC092865.7-201ENST00000641832 219 ntBASIC20.11■□□□□ 0.81
RDH13Q8NBN7 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC20.11■□□□□ 0.81
RDH13Q8NBN7 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RDH13Q8NBN7 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC20.1■□□□□ 0.81
RDH13Q8NBN7 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC20.1■□□□□ 0.81
RDH13Q8NBN7 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC20.1■□□□□ 0.81
RDH13Q8NBN7 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.1■□□□□ 0.81
RDH13Q8NBN7 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.1■□□□□ 0.81
RDH13Q8NBN7 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC20.1■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms