Protein–RNA interactions for Protein: Q8N8F7

LSMEM1, Leucine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 131 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1Q8N8F7 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 ESPNP-201ENST00000270691 2015 ntBASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 AL390955.1-201ENST00000428694 934 ntBASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 EGLN1P1-201ENST00000531623 762 ntBASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
LSMEM1Q8N8F7 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LSMEM1Q8N8F7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LSMEM1Q8N8F7 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
LSMEM1Q8N8F7 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 ITPK1-202ENST00000354313 2803 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 ILF2-202ENST00000368681 726 ntTSL 2 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 C2CD2-202ENST00000380486 6345 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 CIZ1-226ENST00000629610 2855 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
LSMEM1Q8N8F7 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 NOC2LP2-201ENST00000407594 1944 ntBASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 GMCL1P1-201ENST00000463439 1581 ntBASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 POU4F2-201ENST00000281321 3144 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 MIR149-201ENST00000384879 89 ntBASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
LSMEM1Q8N8F7 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 32.4 ms