Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 HBZP1-201ENST00000354915 429 ntBASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 CD320-202ENST00000537716 1119 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 ZNF444P1-201ENST00000559497 298 ntBASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 AR-207ENST00000612010 3896 ntTSL 5 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC18.78■□□□□ 0.6
PCDH20Q8N6Y1 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 ZC3H12D-201ENST00000409806 5791 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 AC092597.1-201ENST00000487352 616 ntBASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 FAM86EP-206ENST00000510506 987 ntBASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 AL136038.3-201ENST00000561909 1096 ntBASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 AC091076.1-201ENST00000610741 619 ntBASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
PCDH20Q8N6Y1 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.77■□□□□ 0.59
PCDH20Q8N6Y1 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.59
PCDH20Q8N6Y1 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 GPX4-201ENST00000354171 919 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 EEF1D-243ENST00000532400 419 ntTSL 3 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 COBL-210ENST00000632460 1941 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.76■□□□□ 0.59
PCDH20Q8N6Y1 NEK2-205ENST00000540251 1318 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 FAM222A-202ENST00000538780 3294 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 PSMD3-201ENST00000264639 2158 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 FOXI3-201ENST00000428390 2804 ntAPPRIS P1 TSL 3 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 AL136038.4-201ENST00000603606 1261 ntBASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 AL358472.4-201ENST00000633140 710 ntBASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.75■□□□□ 0.59
PCDH20Q8N6Y1 AC112777.1-201ENST00000540175 1423 ntBASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
PCDH20Q8N6Y1 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms