Protein–RNA interactions for Protein: Q8N616

LINC00311, Putative uncharacterized protein encoded by LINC00311, humanhuman

Predictions only

Length 119 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00311Q8N616 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 OBSL1-203ENST00000373876 5503 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 AL157888.1-201ENST00000631930 593 ntBASIC14.89□□□□□ -0.03
LINC00311Q8N616 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 GXYLT1-202ENST00000398675 7497 ntAPPRIS P4 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC14.89□□□□□ -0.03
LINC00311Q8N616 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
LINC00311Q8N616 TDRKH-203ENST00000368824 2824 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 AC093010.1-201ENST00000473625 1624 ntBASIC14.88□□□□□ -0.03
LINC00311Q8N616 LINC01126-201ENST00000623515 1646 ntBASIC14.88□□□□□ -0.03
LINC00311Q8N616 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 MICU3-201ENST00000318063 3992 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 SLC25A6P5-201ENST00000435663 894 ntBASIC14.88□□□□□ -0.03
LINC00311Q8N616 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 AL023973.1-201ENST00000624619 620 ntBASIC14.88□□□□□ -0.03
LINC00311Q8N616 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 PBK-203ENST00000522944 1499 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC14.88□□□□□ -0.03
LINC00311Q8N616 NOC2LP1-202ENST00000452600 2235 ntBASIC14.88□□□□□ -0.03
LINC00311Q8N616 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
LINC00311Q8N616 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 FLJ13224-201ENST00000313737 1514 ntBASIC14.87□□□□□ -0.03
LINC00311Q8N616 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 MRPL52-201ENST00000311892 1042 ntTSL 3 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 AC005521.1-201ENST00000393351 872 ntBASIC14.87□□□□□ -0.03
LINC00311Q8N616 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 AL441883.1-201ENST00000566170 1045 ntBASIC14.87□□□□□ -0.03
LINC00311Q8N616 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 AL096828.2-201ENST00000567259 1965 ntBASIC14.87□□□□□ -0.03
LINC00311Q8N616 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC14.87□□□□□ -0.03
LINC00311Q8N616 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
LINC00311Q8N616 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms