Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SLC22A17-204ENST00000397267 2455 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 RELL2-202ENST00000444782 2154 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 PTTG1IP-203ENST00000397887 2413 ntTSL 4 BASIC16.94■□□□□ 0.3
C9orf40Q8IXQ3 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 KCNQ2-218ENST00000629676 2399 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 ESPNP-201ENST00000270691 2015 ntBASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 RNF216P1-205ENST00000406089 807 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 KRT18P48-201ENST00000434763 852 ntBASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 CNP-204ENST00000472031 1019 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 AP000550.4-202ENST00000639755 178 ntBASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 GMCL1P1-201ENST00000463439 1581 ntBASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
C9orf40Q8IXQ3 AC009113.1-201ENST00000570267 2443 ntBASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 AP003733.1-201ENST00000491725 852 ntBASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 RNF126P1-202ENST00000569893 925 ntBASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 AC091076.1-201ENST00000610741 619 ntBASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 AC090164.3-201ENST00000610780 2143 ntBASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 KRT89P-201ENST00000620027 1478 ntBASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
C9orf40Q8IXQ3 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
C9orf40Q8IXQ3 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms