Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 AL024508.2-201ENST00000607749 1894 ntBASIC19.67■□□□□ 0.74
NPAS4Q8IUM7 SDHAP2-201ENST00000455183 2001 ntBASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 AL049812.1-201ENST00000432563 2267 ntBASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 HIST2H3DP1-201ENST00000401004 416 ntBASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 DANCR-204ENST00000444958 709 ntTSL 3 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 AC073648.2-201ENST00000510116 352 ntBASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 AC009154.2-201ENST00000621177 724 ntBASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
NPAS4Q8IUM7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 TYMS-203ENST00000323274 1662 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 TMEM259-202ENST00000356663 2748 ntAPPRIS ALT2 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 SNAI3-AS1-205ENST00000568633 2096 ntBASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 FGFR3P6-201ENST00000457012 610 ntBASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 GZMM-202ENST00000592501 941 ntTSL 3 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 HTD2-206ENST00000481972 1378 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 EEF1D-246ENST00000532741 2387 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 LMO4-202ENST00000370544 5405 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 CCNYL1-202ENST00000339882 2619 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 SLC25A22-228ENST00000628067 2692 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
NPAS4Q8IUM7 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.64■□□□□ 0.74
NPAS4Q8IUM7 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 MEG3-211ENST00000452514 461 ntTSL 3 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 RNPS1P1-201ENST00000507437 918 ntBASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 AC243591.1-201ENST00000452967 1364 ntBASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
NPAS4Q8IUM7 DMRTA2-202ENST00000418121 2840 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.63■□□□□ 0.73
NPAS4Q8IUM7 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms