Protein–RNA interactions for Protein: Q7L0R7

RNF44, RING finger protein 44, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF44Q7L0R7 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 SPDYE13P-201ENST00000445314 798 ntBASIC17.62■□□□□ 0.41
RNF44Q7L0R7 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 ZNF444P1-201ENST00000559497 298 ntBASIC17.62■□□□□ 0.41
RNF44Q7L0R7 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 AL391807.1-203ENST00000604392 2365 ntBASIC17.62■□□□□ 0.41
RNF44Q7L0R7 TIGD6-202ENST00000515406 2429 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
RNF44Q7L0R7 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 ZGPAT-202ENST00000355969 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 HOPX-201ENST00000317745 1129 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 SMYD3-204ENST00000403792 1209 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 GOLGA2P10-204ENST00000618004 1349 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 AC009102.3-201ENST00000623118 1491 ntBASIC17.61■□□□□ 0.41
RNF44Q7L0R7 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 VPS37A-201ENST00000324849 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 ASZ1-201ENST00000284629 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
RNF44Q7L0R7 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 BRI3BP-201ENST00000341446 6648 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 VENTXP5-201ENST00000523979 775 ntBASIC17.6■□□□□ 0.41
RNF44Q7L0R7 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 REEP1-209ENST00000541910 969 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 AL136038.3-201ENST00000561909 1096 ntBASIC17.6■□□□□ 0.41
RNF44Q7L0R7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 UROS-202ENST00000368778 1556 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
RNF44Q7L0R7 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 FAM86EP-206ENST00000510506 987 ntBASIC17.59■□□□□ 0.41
RNF44Q7L0R7 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 CD320-202ENST00000537716 1119 ntTSL 2 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
RNF44Q7L0R7 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms