Protein–RNA interactions for Protein: Q6ZV77

C9orf139, Uncharacterized protein C9orf139, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf139Q6ZV77 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 AC120498.9-201ENST00000339021 3867 ntBASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 AL353692.3-201ENST00000407031 1396 ntBASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
C9orf139Q6ZV77 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 GUCA1A-205ENST00000541991 1921 ntTSL 5 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 TBC1D7-202ENST00000356436 1116 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 HES2-202ENST00000377836 507 ntTSL 2 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 TBC1D7-204ENST00000379300 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 MIR149-201ENST00000384879 89 ntBASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 AL845331.1-201ENST00000424978 1190 ntBASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 FDX1P1-201ENST00000449115 551 ntBASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 RPP14-206ENST00000466547 805 ntAPPRIS P1 TSL 3 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 KRT18P31-201ENST00000506277 1292 ntBASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 AC113404.2-201ENST00000507884 177 ntBASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 H2BFWT-202ENST00000611083 528 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 EDC3-214ENST00000568176 1825 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
C9orf139Q6ZV77 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 IGHV3-47-201ENST00000425060 335 ntBASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 FOXP3-205ENST00000518685 1213 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 AC074051.2-201ENST00000565115 352 ntBASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 ANKRD20A8P-203ENST00000641373 517 ntBASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 SGO1-209ENST00000442720 2266 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 DHRS7-201ENST00000216500 2322 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
C9orf139Q6ZV77 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
C9orf139Q6ZV77 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC14.8□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms