Protein–RNA interactions for Protein: Q6S5L8

SHC4, SHC-transforming protein 4, humanhuman

Predictions only

Length 630 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC4Q6S5L8 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC4Q6S5L8 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC20.75■□□□□ 0.91
SHC4Q6S5L8 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SHC4Q6S5L8 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SHC4Q6S5L8 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
SHC4Q6S5L8 STK4-201ENST00000372801 2038 ntTSL 2 BASIC20.75■□□□□ 0.91
SHC4Q6S5L8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 HIST1H2AM-201ENST00000359611 393 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 TAPBP-236ENST00000456592 817 ntTSL 5 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 MIR4497-201ENST00000583208 89 ntBASIC20.74■□□□□ 0.91
SHC4Q6S5L8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 AP006294.2-201ENST00000641667 209 ntBASIC20.74■□□□□ 0.91
SHC4Q6S5L8 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 KRT17P2-201ENST00000300992 1314 ntBASIC20.74■□□□□ 0.91
SHC4Q6S5L8 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SHC4Q6S5L8 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 PHB2-202ENST00000440277 996 ntTSL 5 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 AC104390.1-201ENST00000555663 520 ntBASIC20.73■□□□□ 0.91
SHC4Q6S5L8 C2orf69P3-201ENST00000565542 1120 ntBASIC20.73■□□□□ 0.91
SHC4Q6S5L8 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 AC010947.1-201ENST00000623454 693 ntBASIC20.73■□□□□ 0.91
SHC4Q6S5L8 AC010653.2-201ENST00000623505 997 ntBASIC20.73■□□□□ 0.91
SHC4Q6S5L8 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 CYSTM1-201ENST00000261811 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC20.73■□□□□ 0.91
SHC4Q6S5L8 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 CKS1B-203ENST00000368439 912 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 ERICH4-201ENST00000378187 946 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 EGLN1P1-201ENST00000531623 762 ntBASIC20.72■□□□□ 0.91
SHC4Q6S5L8 AC112497.1-201ENST00000624824 639 ntBASIC20.72■□□□□ 0.91
SHC4Q6S5L8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SHC4Q6S5L8 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 C1orf159-205ENST00000421241 1841 ntAPPRIS P3 TSL 2 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 ZNF394-201ENST00000337673 2179 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.71■□□□□ 0.91
SHC4Q6S5L8 PTGIR-204ENST00000596260 1009 ntTSL 2 BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 30.1 ms