Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 CA15P1-201ENST00000481698 905 ntBASIC16.75■□□□□ 0.27
NIPAL3Q6P499 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 NAPSB-206ENST00000562112 1266 ntBASIC16.75■□□□□ 0.27
NIPAL3Q6P499 KRT8P45-201ENST00000414328 1447 ntBASIC16.75■□□□□ 0.27
NIPAL3Q6P499 AC112777.1-201ENST00000540175 1423 ntBASIC16.75■□□□□ 0.27
NIPAL3Q6P499 KRT8P9-201ENST00000558927 1449 ntBASIC16.75■□□□□ 0.27
NIPAL3Q6P499 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
NIPAL3Q6P499 NPBWR1-201ENST00000331251 2687 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 BUB3-202ENST00000368859 667 ntTSL 3 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 AL139246.2-201ENST00000456687 1297 ntTSL 5 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 AL357033.4-201ENST00000617703 1807 ntBASIC16.74■□□□□ 0.27
NIPAL3Q6P499 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 TBC1D3P2-202ENST00000577902 1649 ntBASIC16.74■□□□□ 0.27
NIPAL3Q6P499 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 PRSS35-201ENST00000369700 2440 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NIPAL3Q6P499 CYP2D8P-201ENST00000433633 1490 ntBASIC16.73■□□□□ 0.27
NIPAL3Q6P499 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 SLC25A1P2-201ENST00000430693 912 ntBASIC16.73■□□□□ 0.27
NIPAL3Q6P499 CCR12P-201ENST00000446203 998 ntBASIC16.73■□□□□ 0.27
NIPAL3Q6P499 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 RARRES1-204ENST00000479756 839 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NIPAL3Q6P499 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC16.72■□□□□ 0.27
NIPAL3Q6P499 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.72■□□□□ 0.27
NIPAL3Q6P499 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
NIPAL3Q6P499 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.72■□□□□ 0.27
NIPAL3Q6P499 ESPNP-201ENST00000270691 2015 ntBASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms