Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 ENOPH1-201ENST00000273920 2025 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 HAUS4-218ENST00000555986 1626 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.28■□□□□ 0.68
RNF43Q68DV7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
RNF43Q68DV7 KATNBL1P6-202ENST00000562413 1466 ntBASIC19.28■□□□□ 0.68
RNF43Q68DV7 AC036111.1-201ENST00000533973 1582 ntBASIC19.27■□□□□ 0.68
RNF43Q68DV7 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 KRT18P38-201ENST00000449496 1282 ntBASIC19.27■□□□□ 0.68
RNF43Q68DV7 AL671277.2-201ENST00000458060 996 ntBASIC19.27■□□□□ 0.68
RNF43Q68DV7 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC19.27■□□□□ 0.68
RNF43Q68DV7 GCSHP2-201ENST00000560971 527 ntBASIC19.27■□□□□ 0.68
RNF43Q68DV7 AC069148.1-201ENST00000608741 768 ntBASIC19.27■□□□□ 0.68
RNF43Q68DV7 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RNF43Q68DV7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.67
RNF43Q68DV7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RNF43Q68DV7 Z98044.1-201ENST00000632503 1764 ntBASIC19.27■□□□□ 0.67
RNF43Q68DV7 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 TRAPPC3-209ENST00000616395 1336 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF43Q68DV7 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF43Q68DV7 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF43Q68DV7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF43Q68DV7 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 TSPAN14-202ENST00000341863 1037 ntTSL 5 BASIC19.26■□□□□ 0.67
RNF43Q68DV7 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 STARP1-201ENST00000397973 869 ntBASIC19.26■□□□□ 0.67
RNF43Q68DV7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC19.26■□□□□ 0.67
RNF43Q68DV7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC19.26■□□□□ 0.67
RNF43Q68DV7 AC140113.3-201ENST00000605663 199 ntBASIC19.26■□□□□ 0.67
RNF43Q68DV7 HYMAI.1-201ENST00000620949 238 ntBASIC19.26■□□□□ 0.67
RNF43Q68DV7 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
RNF43Q68DV7 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 RFXANK-205ENST00000456252 1325 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 AL359075.1-203ENST00000462729 1002 ntBASIC19.25■□□□□ 0.67
RNF43Q68DV7 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.25■□□□□ 0.67
RNF43Q68DV7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
RNF43Q68DV7 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 RCC2P3-201ENST00000418112 1537 ntBASIC19.25■□□□□ 0.67
RNF43Q68DV7 THAP12-201ENST00000260045 3300 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RNF43Q68DV7 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 25.9 ms