Protein–RNA interactions for Protein: Q5TAT6

COL13A1, Collagen alpha-1(XIII) chain, humanhuman

Predicted RBP Predictions only

Length 717 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1Q5TAT6 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.55■□□□□ 0.88
COL13A1Q5TAT6 PAAF1-205ENST00000535604 1695 ntTSL 5 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 SLC43A3-225ENST00000533524 1879 ntAPPRIS ALT2 TSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 RCC2P3-201ENST00000418112 1537 ntBASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 AC079776.2-201ENST00000641154 1609 ntBASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 C1orf229-201ENST00000623686 2258 ntBASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 POLD4-201ENST00000312419 918 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 RPF1-202ENST00000370656 724 ntTSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 HRAS-205ENST00000451590 1151 ntAPPRIS P1 TSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 CPLX2-206ENST00000512824 518 ntTSL 4 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 LINC00824-206ENST00000523173 920 ntTSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 AC096734.2-201ENST00000562054 433 ntBASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 KLC1-227ENST00000634686 2229 ntTSL 5 BASIC20.54■□□□□ 0.88
COL13A1Q5TAT6 REXO1L6P-201ENST00000603433 1515 ntBASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 TMEM204-202ENST00000566264 1938 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 AL137002.2-201ENST00000639766 2238 ntTSL 5 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 ARHGAP27-207ENST00000528273 2319 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 SPAG11A-201ENST00000326558 612 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 FTCD-AS1-201ENST00000446649 500 ntTSL 2 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 AC124944.1-201ENST00000448113 625 ntTSL 2 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 TMSB15B-204ENST00000540220 665 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 TMSB15B-205ENST00000563257 590 ntTSL 4 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 HOXD1-201ENST00000331462 1975 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 DOCK5-208ENST00000481100 2166 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 LENG9-203ENST00000611161 1916 ntAPPRIS P1 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 AC129492.6-201ENST00000611383 1305 ntBASIC20.53■□□□□ 0.88
COL13A1Q5TAT6 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 ACTR1B-201ENST00000289228 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 AC079776.1-201ENST00000401540 1152 ntBASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 ZFP69B-202ENST00000411995 2109 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 RPL28-209ENST00000560055 670 ntTSL 3 BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 MIR6787-201ENST00000616675 61 ntBASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 ME2-208ENST00000638937 2471 ntTSL 5 BASIC20.52■□□□□ 0.88
COL13A1Q5TAT6 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
COL13A1Q5TAT6 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC20.52■□□□□ 0.87
COL13A1Q5TAT6 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC20.52■□□□□ 0.87
COL13A1Q5TAT6 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
COL13A1Q5TAT6 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC20.52■□□□□ 0.87
COL13A1Q5TAT6 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 C16orf58-209ENST00000567994 1845 ntTSL 5 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 AC006333.2-201ENST00000607957 2099 ntBASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 ENSA-205ENST00000361532 792 ntTSL 2 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 AC125807.1-201ENST00000483097 614 ntBASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 GIMAP3P-201ENST00000495150 836 ntBASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 NECAP2-208ENST00000504551 768 ntTSL 5 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 GZMH-203ENST00000557220 520 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 ELOF1-205ENST00000589171 743 ntTSL 3 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 TEAD2-203ENST00000539846 1444 ntTSL 2 BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
COL13A1Q5TAT6 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms