Protein–RNA interactions for Protein: Q5ST30

VARS2, Valine--tRNA ligase, mitochondrial, humanhuman

Known RBP Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2Q5ST30 AP005901.3-202ENST00000581653 237 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 AC008687.5-201ENST00000593746 558 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 AC099336.1-202ENST00000602961 463 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 AC138894.3-201ENST00000603787 634 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 AL024508.2-201ENST00000607749 1894 ntBASIC19.43■□□□□ 0.7
VARS2Q5ST30 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC19.43■□□□□ 0.7
VARS2Q5ST30 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
VARS2Q5ST30 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VARS2Q5ST30 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VARS2Q5ST30 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VARS2Q5ST30 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
VARS2Q5ST30 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VARS2Q5ST30 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
VARS2Q5ST30 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
VARS2Q5ST30 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 VENTXP7-201ENST00000475503 772 ntBASIC19.42■□□□□ 0.7
VARS2Q5ST30 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 HSP90B1-211ENST00000640977 1127 ntTSL 5 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC19.42■□□□□ 0.7
VARS2Q5ST30 ADK-206ENST00000541550 2222 ntTSL 2 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VARS2Q5ST30 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VARS2Q5ST30 MRPL43-203ENST00000318364 1010 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
VARS2Q5ST30 MRPL43-204ENST00000342071 894 ntTSL 5 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
VARS2Q5ST30 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 CALM1-205ENST00000553542 877 ntTSL 5 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 AC011840.4-201ENST00000578471 627 ntBASIC19.41■□□□□ 0.7
VARS2Q5ST30 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 GXYLT1P4-201ENST00000613576 1192 ntBASIC19.41■□□□□ 0.7
VARS2Q5ST30 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VARS2Q5ST30 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 NARF-204ENST00000390006 1766 ntTSL 2 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.41■□□□□ 0.7
VARS2Q5ST30 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
VARS2Q5ST30 KRT8P10-201ENST00000450021 1447 ntBASIC19.41■□□□□ 0.7
VARS2Q5ST30 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 DDT-203ENST00000403754 569 ntTSL 3 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 DDT-206ENST00000430101 573 ntTSL 2 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 FAAHP1-202ENST00000446499 1238 ntBASIC19.4■□□□□ 0.7
VARS2Q5ST30 EMBP1-201ENST00000458200 901 ntBASIC19.4■□□□□ 0.7
VARS2Q5ST30 BET1L-206ENST00000486280 665 ntTSL 3 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 ABR-204ENST00000543210 1049 ntTSL 2 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 ABR-217ENST00000572441 563 ntTSL 4 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 NDUFA6-204ENST00000617763 1183 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 FAM214B-203ENST00000378561 5771 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC19.4■□□□□ 0.7
VARS2Q5ST30 NSUN5P1-202ENST00000421140 1535 ntBASIC19.4■□□□□ 0.7
VARS2Q5ST30 NSUN5P2-203ENST00000457352 1529 ntBASIC19.4■□□□□ 0.7
VARS2Q5ST30 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
VARS2Q5ST30 ANO7L1-203ENST00000602586 1720 ntBASIC19.39■□□□□ 0.7
VARS2Q5ST30 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.7
VARS2Q5ST30 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.7
VARS2Q5ST30 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.39■□□□□ 0.7
VARS2Q5ST30 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
VARS2Q5ST30 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
VARS2Q5ST30 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC19.39■□□□□ 0.69
VARS2Q5ST30 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
VARS2Q5ST30 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC19.39■□□□□ 0.69
VARS2Q5ST30 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC19.39■□□□□ 0.69
VARS2Q5ST30 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms