Protein–RNA interactions for Protein: Q59EK9

RUNDC3A, RUN domain-containing protein 3A, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3AQ59EK9 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 AF186192.3-201ENST00000583427 947 ntBASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 AC073195.1-201ENST00000607241 877 ntBASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 AP000692.2-201ENST00000608391 879 ntBASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 TBCB-214ENST00000629269 413 ntTSL 5 BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 FAM118A-202ENST00000405673 1612 ntTSL 5 BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 AC034236.2-201ENST00000606662 1610 ntBASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 SPTBN4-212ENST00000598249 8070 ntAPPRIS P2 TSL 1 (best) BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 TCEA1-208ENST00000521604 2858 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
RUNDC3AQ59EK9 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 HLA-DQB1-201ENST00000374943 1656 ntBASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 MESTP1-201ENST00000404287 994 ntBASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 CD24-208ENST00000622315 825 ntAPPRIS ALT2 TSL 2 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 COBLL1-201ENST00000342193 4898 ntAPPRIS P3 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 HCN1-201ENST00000303230 9885 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
RUNDC3AQ59EK9 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 GPAT2P1-201ENST00000444924 1672 ntBASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 MCCD1P1-208ENST00000445732 328 ntBASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 TK2-204ENST00000525974 1178 ntTSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 AC006058.3-201ENST00000606217 1069 ntBASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 CERCAM-202ENST00000372842 5201 ntAPPRIS ALT2 TSL 5 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.36■□□□□ 0.37
RUNDC3AQ59EK9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 SQOR-201ENST00000260324 2003 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 ELP6-205ENST00000439305 880 ntTSL 2 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 C1QBPP2-201ENST00000528754 825 ntBASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 RARRES2P10-201ENST00000564312 460 ntBASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 MNT-208ENST00000575394 606 ntTSL 4 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 FSCN1P1-201ENST00000568912 1481 ntBASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
RUNDC3AQ59EK9 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms