Protein–RNA interactions for Protein: Q496Y0

LONRF3, LON peptidase N-terminal domain and RING finger protein 3, humanhuman

Predictions only

Length 759 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LONRF3Q496Y0 PCDHB18P-201ENST00000524813 2368 ntBASIC20.91■□□□□ 0.94
LONRF3Q496Y0 DBX1-201ENST00000524983 1380 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
LONRF3Q496Y0 SLC44A3-201ENST00000271227 2388 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 SCOC-208ENST00000510586 2193 ntAPPRIS ALT1 TSL 5 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 PRODH-205ENST00000420436 2034 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 AEBP2-201ENST00000266508 3620 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 GSTZ1-204ENST00000393734 1424 ntTSL 5 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 LRRC32-202ENST00000404995 2656 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 TEX13A-202ENST00000609007 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 STK11-201ENST00000326873 2611 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 KRT17P2-202ENST00000326333 1174 ntTSL 2 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 EDARADD-201ENST00000334232 858 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC20.9■□□□□ 0.94
LONRF3Q496Y0 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LONRF3Q496Y0 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC20.89■□□□□ 0.94
LONRF3Q496Y0 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.94
LONRF3Q496Y0 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 HMGA1P5-201ENST00000412453 271 ntBASIC20.89■□□□□ 0.93
LONRF3Q496Y0 AK4P3-201ENST00000418260 669 ntBASIC20.89■□□□□ 0.93
LONRF3Q496Y0 HAGLR-204ENST00000425005 623 ntTSL 3 BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 AC087388.1-201ENST00000571370 1112 ntBASIC20.89■□□□□ 0.93
LONRF3Q496Y0 AC139887.4-201ENST00000607877 719 ntBASIC20.89■□□□□ 0.93
LONRF3Q496Y0 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 EIF4ENIF1-202ENST00000344710 3115 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
LONRF3Q496Y0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 SLC25A1P2-201ENST00000430693 912 ntBASIC20.88■□□□□ 0.93
LONRF3Q496Y0 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC20.88■□□□□ 0.93
LONRF3Q496Y0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 AC099343.3-201ENST00000605834 2503 ntBASIC20.87■□□□□ 0.93
LONRF3Q496Y0 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 AC092338.2-201ENST00000568827 1415 ntBASIC20.87■□□□□ 0.93
LONRF3Q496Y0 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 MRPL54-201ENST00000330133 626 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
LONRF3Q496Y0 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 25.1 ms