Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC16.1■□□□□ 0.17
SEC61A1P61619 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.1■□□□□ 0.17
SEC61A1P61619 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
SEC61A1P61619 DCP1B-201ENST00000280665 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 ZZZ3-201ENST00000370798 2468 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 SIRPAP1-201ENST00000448467 1770 ntBASIC16.1■□□□□ 0.17
SEC61A1P61619 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC16.1■□□□□ 0.17
SEC61A1P61619 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SEC61A1P61619 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SEC61A1P61619 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC16.09■□□□□ 0.17
SEC61A1P61619 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.09■□□□□ 0.17
SEC61A1P61619 RCC2P6-201ENST00000526625 1557 ntBASIC16.09■□□□□ 0.17
SEC61A1P61619 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 TBC1D20-201ENST00000354200 4466 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC16.09■□□□□ 0.17
SEC61A1P61619 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC16.09■□□□□ 0.17
SEC61A1P61619 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
SEC61A1P61619 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
SEC61A1P61619 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC16.09■□□□□ 0.17
SEC61A1P61619 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.09■□□□□ 0.17
SEC61A1P61619 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC16.09■□□□□ 0.17
SEC61A1P61619 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC16.09■□□□□ 0.17
SEC61A1P61619 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
SEC61A1P61619 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC16.09■□□□□ 0.17
SEC61A1P61619 FGD5-201ENST00000285046 5720 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SEC61A1P61619 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
SEC61A1P61619 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC16.08■□□□□ 0.17
SEC61A1P61619 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.17
SEC61A1P61619 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC16.08■□□□□ 0.17
SEC61A1P61619 PPAN-P2RY11-201ENST00000393796 2385 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SEC61A1P61619 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.17
SEC61A1P61619 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.17
SEC61A1P61619 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC16.08■□□□□ 0.17
SEC61A1P61619 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SEC61A1P61619 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SEC61A1P61619 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SEC61A1P61619 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.08■□□□□ 0.16
SEC61A1P61619 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
SEC61A1P61619 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 AL512353.2-201ENST00000448759 1962 ntBASIC16.08■□□□□ 0.16
SEC61A1P61619 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.08■□□□□ 0.16
SEC61A1P61619 ADGRB2-201ENST00000373655 5400 ntAPPRIS P4 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SEC61A1P61619 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SEC61A1P61619 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC16.08■□□□□ 0.16
SEC61A1P61619 DLEU2-203ENST00000425586 1267 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC16.08■□□□□ 0.16
SEC61A1P61619 AC008040.2-201ENST00000461049 708 ntBASIC16.08■□□□□ 0.16
SEC61A1P61619 NME1-207ENST00000480143 964 ntTSL 2 BASIC16.08■□□□□ 0.16
SEC61A1P61619 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC16.08■□□□□ 0.16
SEC61A1P61619 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC16.08■□□□□ 0.16
SEC61A1P61619 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SEC61A1P61619 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC16.08■□□□□ 0.16
SEC61A1P61619 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC16.08■□□□□ 0.16
SEC61A1P61619 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
SEC61A1P61619 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 CYP2D8P-201ENST00000433633 1490 ntBASIC16.08■□□□□ 0.16
SEC61A1P61619 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.08■□□□□ 0.16
SEC61A1P61619 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
SEC61A1P61619 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.08■□□□□ 0.16
SEC61A1P61619 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms