Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC19.31■□□□□ 0.68
ERVFC1P60507 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ERVFC1P60507 FARSA-202ENST00000423140 1720 ntTSL 2 BASIC19.31■□□□□ 0.68
ERVFC1P60507 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.31■□□□□ 0.68
ERVFC1P60507 ZDHHC8P1-201ENST00000255890 2382 ntTSL 2 BASIC19.3■□□□□ 0.68
ERVFC1P60507 ASL-204ENST00000395331 1538 ntTSL 5 BASIC19.3■□□□□ 0.68
ERVFC1P60507 SDHAP2-201ENST00000455183 2001 ntBASIC19.3■□□□□ 0.68
ERVFC1P60507 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC19.3■□□□□ 0.68
ERVFC1P60507 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC19.3■□□□□ 0.68
ERVFC1P60507 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
ERVFC1P60507 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 BX842568.4-201ENST00000421222 227 ntBASIC19.3■□□□□ 0.68
ERVFC1P60507 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.3■□□□□ 0.68
ERVFC1P60507 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.3■□□□□ 0.68
ERVFC1P60507 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.3■□□□□ 0.68
ERVFC1P60507 AC021087.4-201ENST00000563761 564 ntBASIC19.3■□□□□ 0.68
ERVFC1P60507 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC19.3■□□□□ 0.68
ERVFC1P60507 AC008687.5-201ENST00000593746 558 ntBASIC19.3■□□□□ 0.68
ERVFC1P60507 AL138831.2-201ENST00000606564 490 ntBASIC19.3■□□□□ 0.68
ERVFC1P60507 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC19.3■□□□□ 0.68
ERVFC1P60507 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.3■□□□□ 0.68
ERVFC1P60507 AC093484.2-201ENST00000580996 2166 ntBASIC19.3■□□□□ 0.68
ERVFC1P60507 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
ERVFC1P60507 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
ERVFC1P60507 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ERVFC1P60507 CAPS-201ENST00000452990 1789 ntTSL 5 BASIC19.29■□□□□ 0.68
ERVFC1P60507 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC19.29■□□□□ 0.68
ERVFC1P60507 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
ERVFC1P60507 AOC1-202ENST00000416793 2453 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 AL024508.2-201ENST00000607749 1894 ntBASIC19.29■□□□□ 0.68
ERVFC1P60507 LONP1-203ENST00000585374 2882 ntTSL 5 BASIC19.29■□□□□ 0.68
ERVFC1P60507 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 AP001058.1-201ENST00000423967 463 ntTSL 2 BASIC19.29■□□□□ 0.68
ERVFC1P60507 MTCL1P1-201ENST00000446207 792 ntBASIC19.29■□□□□ 0.68
ERVFC1P60507 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC19.29■□□□□ 0.68
ERVFC1P60507 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC19.29■□□□□ 0.68
ERVFC1P60507 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC19.29■□□□□ 0.68
ERVFC1P60507 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC19.29■□□□□ 0.68
ERVFC1P60507 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC19.29■□□□□ 0.68
ERVFC1P60507 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 FBXO25-203ENST00000352684 2360 ntTSL 5 BASIC19.29■□□□□ 0.68
ERVFC1P60507 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
ERVFC1P60507 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
ERVFC1P60507 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC19.28■□□□□ 0.68
ERVFC1P60507 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC19.28■□□□□ 0.68
ERVFC1P60507 CLN3-216ENST00000565316 1318 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC19.28■□□□□ 0.68
ERVFC1P60507 ANKRD13D-202ENST00000447274 2881 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.28■□□□□ 0.68
ERVFC1P60507 AP005117.1-201ENST00000584346 1413 ntBASIC19.28■□□□□ 0.68
ERVFC1P60507 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.28■□□□□ 0.68
ERVFC1P60507 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ERVFC1P60507 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.28■□□□□ 0.68
ERVFC1P60507 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
ERVFC1P60507 AP005233.1-201ENST00000562341 2424 ntTSL 2 BASIC19.28■□□□□ 0.68
ERVFC1P60507 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 CSF3-203ENST00000394148 622 ntTSL 3 BASIC19.28■□□□□ 0.68
ERVFC1P60507 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.28■□□□□ 0.68
ERVFC1P60507 SART3-203ENST00000546611 1184 ntBASIC19.28■□□□□ 0.68
ERVFC1P60507 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC19.28■□□□□ 0.68
ERVFC1P60507 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC19.28■□□□□ 0.68
ERVFC1P60507 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC19.28■□□□□ 0.68
ERVFC1P60507 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 ARSB-201ENST00000264914 5327 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
ERVFC1P60507 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
ERVFC1P60507 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC19.27■□□□□ 0.68
ERVFC1P60507 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC19.27■□□□□ 0.68
ERVFC1P60507 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
ERVFC1P60507 MSL1-206ENST00000579565 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 49.2 ms