Protein–RNA interactions for Protein: P54760

EPHB4, Ephrin type-B receptor 4, humanhuman

Predictions only

Length 987 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB4P54760 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC20.63■□□□□ 0.89
EPHB4P54760 CRTC3-208ENST00000560098 1421 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.63■□□□□ 0.89
EPHB4P54760 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC20.63■□□□□ 0.89
EPHB4P54760 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 AL023284.2-201ENST00000405850 579 ntBASIC20.63■□□□□ 0.89
EPHB4P54760 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.63■□□□□ 0.89
EPHB4P54760 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC20.63■□□□□ 0.89
EPHB4P54760 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
EPHB4P54760 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
EPHB4P54760 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC20.62■□□□□ 0.89
EPHB4P54760 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 PMS2P1-201ENST00000431037 1228 ntBASIC20.62■□□□□ 0.89
EPHB4P54760 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 AC104819.1-201ENST00000504587 486 ntBASIC20.62■□□□□ 0.89
EPHB4P54760 RNA5SP419-201ENST00000515908 135 ntBASIC20.62■□□□□ 0.89
EPHB4P54760 SLC25A1P1-201ENST00000528351 927 ntBASIC20.62■□□□□ 0.89
EPHB4P54760 TPM1-218ENST00000559281 851 ntTSL 5 BASIC20.62■□□□□ 0.89
EPHB4P54760 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC20.62■□□□□ 0.89
EPHB4P54760 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC20.62■□□□□ 0.89
EPHB4P54760 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 AC009237.14-201ENST00000609975 1594 ntBASIC20.62■□□□□ 0.89
EPHB4P54760 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
EPHB4P54760 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.62■□□□□ 0.89
EPHB4P54760 SNAI3-AS1-202ENST00000563475 2081 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
EPHB4P54760 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EPHB4P54760 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC20.61■□□□□ 0.89
EPHB4P54760 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
EPHB4P54760 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EPHB4P54760 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC20.61■□□□□ 0.89
EPHB4P54760 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC20.61■□□□□ 0.89
EPHB4P54760 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC20.61■□□□□ 0.89
EPHB4P54760 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
EPHB4P54760 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC20.61■□□□□ 0.89
EPHB4P54760 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20.61■□□□□ 0.89
EPHB4P54760 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.61■□□□□ 0.89
EPHB4P54760 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
EPHB4P54760 LINC00167-201ENST00000530583 1419 ntBASIC20.61■□□□□ 0.89
EPHB4P54760 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.61■□□□□ 0.89
EPHB4P54760 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.61■□□□□ 0.89
EPHB4P54760 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHB4P54760 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EPHB4P54760 AC007613.1-201ENST00000572811 2597 ntBASIC20.6■□□□□ 0.89
EPHB4P54760 UBC-206ENST00000538617 1303 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHB4P54760 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC20.6■□□□□ 0.89
EPHB4P54760 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHB4P54760 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
EPHB4P54760 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHB4P54760 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHB4P54760 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHB4P54760 CXXC5-AS1-201ENST00000514287 577 ntTSL 4 BASIC20.6■□□□□ 0.89
EPHB4P54760 ABR-204ENST00000543210 1049 ntTSL 2 BASIC20.6■□□□□ 0.89
EPHB4P54760 AC074051.2-201ENST00000565115 352 ntBASIC20.6■□□□□ 0.89
EPHB4P54760 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHB4P54760 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHB4P54760 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHB4P54760 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC20.6■□□□□ 0.89
EPHB4P54760 ANKRD53-202ENST00000360589 1666 ntAPPRIS ALT2 TSL 2 BASIC20.6■□□□□ 0.89
EPHB4P54760 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHB4P54760 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
EPHB4P54760 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
EPHB4P54760 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
EPHB4P54760 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC20.59■□□□□ 0.89
EPHB4P54760 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 30.8 ms