Protein–RNA interactions for Protein: P53396

ACLY, ATP-citrate synthase, humanhuman

Predictions only

Length 1,101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ACLYP53396 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
ACLYP53396 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 UNKL-205ENST00000397464 2180 ntTSL 2 BASIC20.21■□□□□ 0.83
ACLYP53396 AC125634.1-201ENST00000438758 1403 ntBASIC20.21■□□□□ 0.83
ACLYP53396 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC20.21■□□□□ 0.83
ACLYP53396 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
ACLYP53396 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
ACLYP53396 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC20.21■□□□□ 0.83
ACLYP53396 AP000355.1-201ENST00000432032 480 ntTSL 5 BASIC20.21■□□□□ 0.83
ACLYP53396 ABCD1P5-201ENST00000445663 754 ntBASIC20.21■□□□□ 0.83
ACLYP53396 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC20.21■□□□□ 0.83
ACLYP53396 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC20.21■□□□□ 0.83
ACLYP53396 AC140113.2-201ENST00000604370 208 ntBASIC20.21■□□□□ 0.83
ACLYP53396 FAM197Y3-203ENST00000618346 717 ntBASIC20.21■□□□□ 0.83
ACLYP53396 AC055717.3-201ENST00000622967 595 ntBASIC20.21■□□□□ 0.83
ACLYP53396 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.21■□□□□ 0.83
ACLYP53396 NOS3-204ENST00000467517 2377 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
ACLYP53396 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ACLYP53396 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
ACLYP53396 AMER2-202ENST00000515384 3197 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
ACLYP53396 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC20.2■□□□□ 0.82
ACLYP53396 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.2■□□□□ 0.82
ACLYP53396 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC20.2■□□□□ 0.82
ACLYP53396 BEAN1-203ENST00000561796 1078 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC20.2■□□□□ 0.82
ACLYP53396 AL356488.2-201ENST00000602755 427 ntBASIC20.2■□□□□ 0.82
ACLYP53396 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
ACLYP53396 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ACLYP53396 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 AL158211.5-201ENST00000623583 2518 ntBASIC20.2■□□□□ 0.82
ACLYP53396 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
ACLYP53396 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC20.2■□□□□ 0.82
ACLYP53396 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC20.2■□□□□ 0.82
ACLYP53396 HLA-J-201ENST00000462773 1622 ntBASIC20.2■□□□□ 0.82
ACLYP53396 ODC1-201ENST00000234111 2653 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
ACLYP53396 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 DHRS12-201ENST00000218981 1970 ntTSL 2 BASIC20.19■□□□□ 0.82
ACLYP53396 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 REEP4-202ENST00000334530 1476 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC20.19■□□□□ 0.82
ACLYP53396 TNKS2-201ENST00000371627 6157 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 CLK3-202ENST00000395066 2621 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 MATK-203ENST00000395045 2073 ntAPPRIS P4 TSL 2 BASIC20.19■□□□□ 0.82
ACLYP53396 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC20.19■□□□□ 0.82
ACLYP53396 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC20.19■□□□□ 0.82
ACLYP53396 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC20.19■□□□□ 0.82
ACLYP53396 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.19■□□□□ 0.82
ACLYP53396 ICAM4-202ENST00000380770 1211 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 MED15P5-201ENST00000423150 992 ntBASIC20.19■□□□□ 0.82
ACLYP53396 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC20.19■□□□□ 0.82
ACLYP53396 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC20.19■□□□□ 0.82
ACLYP53396 AC034105.1-201ENST00000563488 319 ntBASIC20.19■□□□□ 0.82
ACLYP53396 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC20.19■□□□□ 0.82
ACLYP53396 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC20.19■□□□□ 0.82
ACLYP53396 AL024508.2-201ENST00000607749 1894 ntBASIC20.19■□□□□ 0.82
ACLYP53396 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.19■□□□□ 0.82
ACLYP53396 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC20.19■□□□□ 0.82
ACLYP53396 EFS-203ENST00000429593 2610 ntTSL 2 BASIC20.19■□□□□ 0.82
ACLYP53396 KXD1-201ENST00000222307 1426 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
ACLYP53396 CSPG5-203ENST00000456150 2089 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
ACLYP53396 LRRC45-201ENST00000306688 2701 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACLYP53396 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC20.18■□□□□ 0.82
ACLYP53396 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACLYP53396 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC20.18■□□□□ 0.82
ACLYP53396 ME2-218ENST00000640965 2476 ntTSL 5 BASIC20.18■□□□□ 0.82
ACLYP53396 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACLYP53396 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACLYP53396 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
ACLYP53396 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
ACLYP53396 LBH-204ENST00000406087 559 ntTSL 4 BASIC20.18■□□□□ 0.82
ACLYP53396 C21orf33-205ENST00000427803 1077 ntTSL 2 BASIC20.18■□□□□ 0.82
ACLYP53396 AC098831.1-202ENST00000438821 336 ntBASIC20.18■□□□□ 0.82
ACLYP53396 AL591424.1-201ENST00000442569 1213 ntBASIC20.18■□□□□ 0.82
ACLYP53396 AC092910.1-201ENST00000482027 1129 ntBASIC20.18■□□□□ 0.82
ACLYP53396 AC012640.2-201ENST00000561606 901 ntBASIC20.18■□□□□ 0.82
ACLYP53396 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC20.18■□□□□ 0.82
ACLYP53396 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC20.18■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms