Protein–RNA interactions for Protein: P52788

SMS, Spermine synthase, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMSP52788 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC17.24■□□□□ 0.35
SMSP52788 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.24■□□□□ 0.35
SMSP52788 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.24■□□□□ 0.35
SMSP52788 HLA-A-209ENST00000638375 975 ntBASIC17.24■□□□□ 0.35
SMSP52788 MYC-208ENST00000641036 567 ntBASIC17.24■□□□□ 0.35
SMSP52788 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC17.24■□□□□ 0.35
SMSP52788 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMSP52788 STRADB-202ENST00000392249 2190 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 AC135782.1-201ENST00000537498 2154 ntTSL 2 BASIC17.23■□□□□ 0.35
SMSP52788 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC17.23■□□□□ 0.35
SMSP52788 AL133373.2-201ENST00000623187 2828 ntBASIC17.23■□□□□ 0.35
SMSP52788 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.23■□□□□ 0.35
SMSP52788 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC17.23■□□□□ 0.35
SMSP52788 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC17.23■□□□□ 0.35
SMSP52788 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 ANKRD20A18P-201ENST00000359341 492 ntBASIC17.23■□□□□ 0.35
SMSP52788 TSPY21P-201ENST00000433481 731 ntBASIC17.23■□□□□ 0.35
SMSP52788 AC007663.1-201ENST00000438948 1240 ntBASIC17.23■□□□□ 0.35
SMSP52788 HOMER2P1-201ENST00000455653 964 ntBASIC17.23■□□□□ 0.35
SMSP52788 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.23■□□□□ 0.35
SMSP52788 LINC01385-201ENST00000512310 780 ntTSL 4 BASIC17.23■□□□□ 0.35
SMSP52788 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC17.23■□□□□ 0.35
SMSP52788 AC140113.3-201ENST00000605663 199 ntBASIC17.23■□□□□ 0.35
SMSP52788 AC141257.4-201ENST00000634557 245 ntBASIC17.23■□□□□ 0.35
SMSP52788 AC136944.6-201ENST00000634818 245 ntBASIC17.23■□□□□ 0.35
SMSP52788 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
SMSP52788 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC17.23■□□□□ 0.35
SMSP52788 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 SPNS3-201ENST00000355530 2133 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMSP52788 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMSP52788 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMSP52788 ISL2-201ENST00000290759 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMSP52788 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 ABALON-201ENST00000629058 1903 ntBASIC17.22■□□□□ 0.35
SMSP52788 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SMSP52788 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 ALKBH4-201ENST00000292566 2105 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 DERL1-203ENST00000419562 918 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 UBE2E1-AS1-201ENST00000426702 778 ntTSL 3 BASIC17.22■□□□□ 0.35
SMSP52788 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.22■□□□□ 0.35
SMSP52788 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMSP52788 NMU-205ENST00000511469 756 ntTSL 3 BASIC17.22■□□□□ 0.35
SMSP52788 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC17.22■□□□□ 0.35
SMSP52788 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.22■□□□□ 0.35
SMSP52788 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 AL121956.5-201ENST00000625261 221 ntBASIC17.22■□□□□ 0.35
SMSP52788 AC005906.2-206ENST00000638180 1029 ntTSL 5 BASIC17.22■□□□□ 0.35
SMSP52788 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC17.22■□□□□ 0.35
SMSP52788 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC17.22■□□□□ 0.35
SMSP52788 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
SMSP52788 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SMSP52788 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMSP52788 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMSP52788 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 51 ms