Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC20.33■□□□□ 0.85
CPT1AP50416 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20.33■□□□□ 0.85
CPT1AP50416 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPT1AP50416 IL9RP2-201ENST00000423948 1312 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 AL024508.2-201ENST00000607749 1894 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPT1AP50416 TP73-AS1-210ENST00000637775 1455 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
CPT1AP50416 RCN1P2-201ENST00000398357 915 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
CPT1AP50416 AL031284.1-201ENST00000419297 478 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 PMS2P1-201ENST00000431037 1228 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 AC093909.1-201ENST00000504731 1122 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.33■□□□□ 0.85
CPT1AP50416 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC20.33■□□□□ 0.85
CPT1AP50416 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC20.33■□□□□ 0.85
CPT1AP50416 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
CPT1AP50416 AC006538.3-201ENST00000612495 578 ntBASIC20.33■□□□□ 0.85
CPT1AP50416 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC20.33■□□□□ 0.85
CPT1AP50416 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPT1AP50416 GLYCTK-202ENST00000436784 1982 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPT1AP50416 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC20.33■□□□□ 0.84
CPT1AP50416 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPT1AP50416 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
CPT1AP50416 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
CPT1AP50416 AC026362.1-201ENST00000540866 5618 ntTSL 2 BASIC20.33■□□□□ 0.84
CPT1AP50416 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC20.33■□□□□ 0.84
CPT1AP50416 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
CPT1AP50416 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.32■□□□□ 0.84
CPT1AP50416 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC20.32■□□□□ 0.84
CPT1AP50416 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CPT1AP50416 INO80E-201ENST00000304516 1489 ntTSL 2 BASIC20.32■□□□□ 0.84
CPT1AP50416 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 AL049812.1-201ENST00000432563 2267 ntBASIC20.32■□□□□ 0.84
CPT1AP50416 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20.32■□□□□ 0.84
CPT1AP50416 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 CLPB-202ENST00000340729 2071 ntTSL 2 BASIC20.32■□□□□ 0.84
CPT1AP50416 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC20.32■□□□□ 0.84
CPT1AP50416 TNFSF13-204ENST00000396542 726 ntTSL 3 BASIC20.32■□□□□ 0.84
CPT1AP50416 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC20.32■□□□□ 0.84
CPT1AP50416 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC20.32■□□□□ 0.84
CPT1AP50416 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.32■□□□□ 0.84
CPT1AP50416 AC009533.2-201ENST00000543664 586 ntBASIC20.32■□□□□ 0.84
CPT1AP50416 NME4-212ENST00000621774 904 ntTSL 3 BASIC20.32■□□□□ 0.84
CPT1AP50416 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
CPT1AP50416 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
CPT1AP50416 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
CPT1AP50416 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
CPT1AP50416 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
CPT1AP50416 USP39-202ENST00000409025 1946 ntTSL 5 BASIC20.31■□□□□ 0.84
CPT1AP50416 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC20.31■□□□□ 0.84
CPT1AP50416 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC20.31■□□□□ 0.84
CPT1AP50416 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CPT1AP50416 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
CPT1AP50416 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
CPT1AP50416 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC20.31■□□□□ 0.84
CPT1AP50416 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 DANCR-204ENST00000444958 709 ntTSL 3 BASIC20.31■□□□□ 0.84
CPT1AP50416 MAP1LC3B-207ENST00000565788 625 ntTSL 2 BASIC20.31■□□□□ 0.84
CPT1AP50416 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CPT1AP50416 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.31■□□□□ 0.84
CPT1AP50416 AF228730.7-201ENST00000641842 219 ntBASIC20.31■□□□□ 0.84
CPT1AP50416 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC20.31■□□□□ 0.84
CPT1AP50416 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
CPT1AP50416 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.31■□□□□ 0.84
CPT1AP50416 KCNMA1-252ENST00000639120 2308 ntTSL 5 BASIC20.31■□□□□ 0.84
CPT1AP50416 MAP3K21-203ENST00000366624 5809 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
CPT1AP50416 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC20.3■□□□□ 0.84
CPT1AP50416 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC20.3■□□□□ 0.84
CPT1AP50416 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
CPT1AP50416 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
CPT1AP50416 HIST2H3DP1-201ENST00000401004 416 ntBASIC20.3■□□□□ 0.84
CPT1AP50416 RBM17P3-201ENST00000417687 1192 ntBASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms