Protein–RNA interactions for Protein: P49458

SRP9, Signal recognition particle 9 kDa protein, humanhuman

Known RBP Predictions only

Length 86 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRP9P49458 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRP9P49458 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.33■□□□□ 0.21
SRP9P49458 AD000671.2-201ENST00000589807 1925 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.21
SRP9P49458 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC16.33■□□□□ 0.21
SRP9P49458 RABL6-203ENST00000371663 3078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRP9P49458 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.33■□□□□ 0.21
SRP9P49458 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
SRP9P49458 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 PITPNA-202ENST00000539476 3612 ntAPPRIS ALT1 TSL 5 BASIC16.33■□□□□ 0.2
SRP9P49458 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 AC004951.3-201ENST00000418645 1148 ntBASIC16.33■□□□□ 0.2
SRP9P49458 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.33■□□□□ 0.2
SRP9P49458 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 MIR4497-201ENST00000583208 89 ntBASIC16.33■□□□□ 0.2
SRP9P49458 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC16.33■□□□□ 0.2
SRP9P49458 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC16.33■□□□□ 0.2
SRP9P49458 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC16.33■□□□□ 0.2
SRP9P49458 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SRP9P49458 PRSS50-202ENST00000315170 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 UBQLN4P1-201ENST00000461599 1801 ntBASIC16.33■□□□□ 0.2
SRP9P49458 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.33■□□□□ 0.2
SRP9P49458 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
SRP9P49458 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
SRP9P49458 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 ZNF133-212ENST00000622607 2660 ntAPPRIS ALT2 TSL 4 BASIC16.32■□□□□ 0.2
SRP9P49458 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
SRP9P49458 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 SLC22A4-201ENST00000200652 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP9P49458 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
SRP9P49458 PBX2-201ENST00000375050 3205 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP9P49458 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
SRP9P49458 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC16.32■□□□□ 0.2
SRP9P49458 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
SRP9P49458 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP9P49458 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC16.32■□□□□ 0.2
SRP9P49458 KANSL2-212ENST00000550347 2714 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 MIR6786-201ENST00000616843 113 ntBASIC16.32■□□□□ 0.2
SRP9P49458 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 SEL1L3-202ENST00000399878 4520 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
SRP9P49458 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 SLC47A2-202ENST00000350657 2285 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
SRP9P49458 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 PRR29-AS1-202ENST00000580942 2926 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
SRP9P49458 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 DERL1-203ENST00000419562 918 ntTSL 2 BASIC16.31■□□□□ 0.2
SRP9P49458 TSPY7P-201ENST00000431358 1114 ntBASIC16.31■□□□□ 0.2
SRP9P49458 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC16.31■□□□□ 0.2
SRP9P49458 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 Z85996.1-201ENST00000494644 937 ntBASIC16.31■□□□□ 0.2
SRP9P49458 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SRP9P49458 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 49.1 ms