Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 TSC22D4-202ENST00000393991 1469 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC14.53□□□□□ -0.08
CDC34P49427 HSD17B10-202ENST00000375298 823 ntTSL 3 BASIC14.53□□□□□ -0.08
CDC34P49427 AC012146.1-202ENST00000413077 474 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 C19orf81-201ENST00000425202 765 ntAPPRIS P2 TSL 5 BASIC14.53□□□□□ -0.08
CDC34P49427 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC14.53□□□□□ -0.08
CDC34P49427 IDNK-204ENST00000454393 1210 ntTSL 3 BASIC14.53□□□□□ -0.08
CDC34P49427 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC14.53□□□□□ -0.08
CDC34P49427 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 TPBG-203ENST00000543496 2881 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 FAM184A-201ENST00000338891 4141 ntAPPRIS P4 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 TBKBP1-204ENST00000622396 2010 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
CDC34P49427 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC14.53□□□□□ -0.08
CDC34P49427 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC34P49427 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDC34P49427 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
CDC34P49427 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC34P49427 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC14.52□□□□□ -0.08
CDC34P49427 STAT3-201ENST00000264657 5047 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC34P49427 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC34P49427 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
CDC34P49427 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC14.52□□□□□ -0.08
CDC34P49427 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC14.52□□□□□ -0.08
CDC34P49427 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC34P49427 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
CDC34P49427 DIP2A-204ENST00000457905 3044 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
CDC34P49427 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 ATE1-AS1-201ENST00000437593 951 ntTSL 2 BASIC14.52□□□□□ -0.09
CDC34P49427 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC14.52□□□□□ -0.09
CDC34P49427 TPT1-AS1-210ENST00000520590 873 ntTSL 5 BASIC14.52□□□□□ -0.09
CDC34P49427 AL929601.1-201ENST00000551565 573 ntTSL 4 BASIC14.52□□□□□ -0.09
CDC34P49427 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC14.52□□□□□ -0.09
CDC34P49427 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.09
CDC34P49427 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 JMJD4-201ENST00000366758 2595 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
CDC34P49427 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 POU5F1-201ENST00000259915 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 IL15RA-201ENST00000379971 588 ntTSL 3 BASIC14.51□□□□□ -0.09
CDC34P49427 CSF1-205ENST00000420111 1083 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 NME6-213ENST00000451657 871 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 AC105020.4-201ENST00000569467 563 ntTSL 4 BASIC14.51□□□□□ -0.09
CDC34P49427 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC14.51□□□□□ -0.09
CDC34P49427 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 C5AR2-202ENST00000600626 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
CDC34P49427 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC14.51□□□□□ -0.09
CDC34P49427 TAF3-201ENST00000344293 4872 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 AC141586.5-201ENST00000624546 2050 ntBASIC14.51□□□□□ -0.09
CDC34P49427 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
CDC34P49427 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 72.5 ms