Protein–RNA interactions for Protein: P35606

COPB2, Coatomer subunit beta', humanhuman

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPB2P35606 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 DRD5-201ENST00000304374 2330 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
COPB2P35606 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.97■□□□□ 0.95
COPB2P35606 NUS1P2-201ENST00000417358 873 ntBASIC20.97■□□□□ 0.95
COPB2P35606 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 TMEM218-203ENST00000526175 972 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
COPB2P35606 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 FAM220A-205ENST00000578372 207 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 AC011455.1-201ENST00000593830 504 ntTSL 3 BASIC20.97■□□□□ 0.95
COPB2P35606 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
COPB2P35606 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
COPB2P35606 VPS51-217ENST00000639871 243 ntTSL 5 BASIC20.97■□□□□ 0.95
COPB2P35606 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.97■□□□□ 0.95
COPB2P35606 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 AURKA-202ENST00000347343 2248 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
COPB2P35606 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 AC098818.2-201ENST00000564925 2320 ntBASIC20.96■□□□□ 0.95
COPB2P35606 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 IRGC-201ENST00000244314 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC20.96■□□□□ 0.95
COPB2P35606 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
COPB2P35606 TMEM14A-201ENST00000211314 992 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.96■□□□□ 0.95
COPB2P35606 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC20.96■□□□□ 0.95
COPB2P35606 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC20.96■□□□□ 0.95
COPB2P35606 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC20.96■□□□□ 0.95
COPB2P35606 SLC25A6P4-201ENST00000586535 553 ntBASIC20.96■□□□□ 0.95
COPB2P35606 IGHV3OR16-7-201ENST00000604106 360 ntBASIC20.96■□□□□ 0.95
COPB2P35606 AC064862.7-201ENST00000604520 867 ntBASIC20.96■□□□□ 0.95
COPB2P35606 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
COPB2P35606 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC20.96■□□□□ 0.95
COPB2P35606 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
COPB2P35606 UTP18-201ENST00000225298 1894 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
COPB2P35606 AC093484.2-201ENST00000580996 2166 ntBASIC20.96■□□□□ 0.95
COPB2P35606 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC20.96■□□□□ 0.95
COPB2P35606 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.96■□□□□ 0.95
COPB2P35606 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC20.96■□□□□ 0.95
COPB2P35606 AC112777.1-201ENST00000540175 1423 ntBASIC20.95■□□□□ 0.95
COPB2P35606 GABRG3-206ENST00000555083 1405 ntTSL 2 BASIC20.95■□□□□ 0.95
COPB2P35606 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
COPB2P35606 INPP4A-201ENST00000074304 6752 ntTSL 5 BASIC20.95■□□□□ 0.94
COPB2P35606 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC20.95■□□□□ 0.94
COPB2P35606 DLK2-203ENST00000372488 1590 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 AKR1C7P-201ENST00000305623 895 ntBASIC20.95■□□□□ 0.94
COPB2P35606 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC20.95■□□□□ 0.94
COPB2P35606 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC20.95■□□□□ 0.94
COPB2P35606 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.95■□□□□ 0.94
COPB2P35606 TTYH3-201ENST00000258796 4840 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 AL020996.1-203ENST00000536896 2307 ntBASIC20.95■□□□□ 0.94
COPB2P35606 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
COPB2P35606 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.95■□□□□ 0.94
COPB2P35606 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.94■□□□□ 0.94
COPB2P35606 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 CLINT1-207ENST00000523908 2346 ntAPPRIS ALT1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC20.94■□□□□ 0.94
COPB2P35606 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC20.94■□□□□ 0.94
COPB2P35606 CCS-201ENST00000310190 942 ntTSL 5 BASIC20.94■□□□□ 0.94
COPB2P35606 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC20.94■□□□□ 0.94
COPB2P35606 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 AC091607.1-201ENST00000490318 1060 ntBASIC20.94■□□□□ 0.94
COPB2P35606 NDUFB9-204ENST00000518008 789 ntTSL 2 BASIC20.94■□□□□ 0.94
COPB2P35606 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC20.94■□□□□ 0.94
COPB2P35606 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC20.94■□□□□ 0.94
COPB2P35606 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC20.94■□□□□ 0.94
COPB2P35606 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
COPB2P35606 KMT5B-205ENST00000402789 1599 ntTSL 5 BASIC20.93■□□□□ 0.94
COPB2P35606 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPB2P35606 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC20.93■□□□□ 0.94
COPB2P35606 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPB2P35606 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPB2P35606 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC20.93■□□□□ 0.94
COPB2P35606 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
COPB2P35606 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
COPB2P35606 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.93■□□□□ 0.94
COPB2P35606 AC016590.1-204ENST00000586442 813 ntTSL 5 BASIC20.93■□□□□ 0.94
COPB2P35606 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms