Protein–RNA interactions for Protein: P31267

HOXA6, Homeobox protein Hox-A6, humanhuman

Predictions only

Length 233 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA6P31267 GSPT1-203ENST00000439887 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA6P31267 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA6P31267 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
HOXA6P31267 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
HOXA6P31267 AL024508.2-201ENST00000607749 1894 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 AP000662.2-202ENST00000530595 2790 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
HOXA6P31267 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 KRT18P65-201ENST00000439811 1286 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 AL049569.1-201ENST00000446261 636 ntTSL 3 BASIC18.09■□□□□ 0.49
HOXA6P31267 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXA6P31267 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC18.09■□□□□ 0.49
HOXA6P31267 HS6ST1P1-201ENST00000481504 1234 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 UNC93B6-202ENST00000528242 690 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 AC135050.2-203ENST00000529564 725 ntAPPRIS P1 TSL 4 BASIC18.09■□□□□ 0.49
HOXA6P31267 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC18.09■□□□□ 0.49
HOXA6P31267 ATP6V0C-202ENST00000564973 1081 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 MTDHP4-201ENST00000600287 670 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 LINC02084-201ENST00000606069 1096 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 AC134684.3-201ENST00000641758 218 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC18.09■□□□□ 0.49
HOXA6P31267 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC18.09■□□□□ 0.49
HOXA6P31267 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
HOXA6P31267 LINC01006-201ENST00000333319 2292 ntBASIC18.09■□□□□ 0.49
HOXA6P31267 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HOXA6P31267 BTG3-202ENST00000348354 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.49
HOXA6P31267 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC18.08■□□□□ 0.49
HOXA6P31267 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC18.08■□□□□ 0.49
HOXA6P31267 AC022898.2-201ENST00000616822 1312 ntBASIC18.08■□□□□ 0.49
HOXA6P31267 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.08■□□□□ 0.48
HOXA6P31267 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 SPDYC-201ENST00000377185 991 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 PARK7-203ENST00000377491 977 ntAPPRIS P1 TSL 3 BASIC18.08■□□□□ 0.48
HOXA6P31267 LAGE3P1-201ENST00000425356 484 ntBASIC18.08■□□□□ 0.48
HOXA6P31267 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.08■□□□□ 0.48
HOXA6P31267 AL121672.1-201ENST00000439423 1181 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 AC012363.1-201ENST00000455707 575 ntTSL 4 BASIC18.08■□□□□ 0.48
HOXA6P31267 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.08■□□□□ 0.48
HOXA6P31267 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.08■□□□□ 0.48
HOXA6P31267 NKAPP1-205ENST00000585790 367 ntBASIC18.08■□□□□ 0.48
HOXA6P31267 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.08■□□□□ 0.48
HOXA6P31267 AP000867.4-201ENST00000641616 219 ntBASIC18.08■□□□□ 0.48
HOXA6P31267 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
HOXA6P31267 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC18.08■□□□□ 0.48
HOXA6P31267 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC18.08■□□□□ 0.48
HOXA6P31267 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
HOXA6P31267 LINC01140-202ENST00000467438 2375 ntTSL 2 BASIC18.08■□□□□ 0.48
HOXA6P31267 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 AC112907.3-201ENST00000577781 2400 ntBASIC18.07■□□□□ 0.48
HOXA6P31267 SDHAP2-201ENST00000455183 2001 ntBASIC18.07■□□□□ 0.48
HOXA6P31267 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC18.07■□□□□ 0.48
HOXA6P31267 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.07■□□□□ 0.48
HOXA6P31267 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC18.07■□□□□ 0.48
HOXA6P31267 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC18.07■□□□□ 0.48
HOXA6P31267 MTDHP5-201ENST00000598980 586 ntBASIC18.07■□□□□ 0.48
HOXA6P31267 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXA6P31267 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC18.07■□□□□ 0.48
HOXA6P31267 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.07■□□□□ 0.48
HOXA6P31267 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC18.07■□□□□ 0.48
HOXA6P31267 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
HOXA6P31267 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXA6P31267 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXA6P31267 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC18.06■□□□□ 0.48
HOXA6P31267 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXA6P31267 SLBP-201ENST00000318386 1635 ntAPPRIS ALT1 TSL 3 BASIC18.06■□□□□ 0.48
HOXA6P31267 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
HOXA6P31267 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXA6P31267 PIH1D1-201ENST00000262265 1192 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
HOXA6P31267 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXA6P31267 AC007364.1-201ENST00000449714 1022 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXA6P31267 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18.06■□□□□ 0.48
HOXA6P31267 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC18.06■□□□□ 0.48
HOXA6P31267 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
HOXA6P31267 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC18.06■□□□□ 0.48
HOXA6P31267 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms