Protein–RNA interactions for Protein: P29973

CNGA1, cGMP-gated cation channel alpha-1, humanhuman

Predictions only

Length 690 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1P29973 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNGA1P29973 YWHAZ-204ENST00000395953 994 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CNGA1P29973 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC20.89■□□□□ 0.93
CNGA1P29973 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.89■□□□□ 0.93
CNGA1P29973 PPOX-214ENST00000535223 664 ntTSL 3 BASIC20.89■□□□□ 0.93
CNGA1P29973 AC011840.4-201ENST00000578471 627 ntBASIC20.89■□□□□ 0.93
CNGA1P29973 TEN1-204ENST00000588202 862 ntTSL 3 BASIC20.89■□□□□ 0.93
CNGA1P29973 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.89■□□□□ 0.93
CNGA1P29973 AC114490.1-202ENST00000311990 1887 ntTSL 1 (best) BASIC20.89■□□□□ 0.93
CNGA1P29973 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC20.89■□□□□ 0.93
CNGA1P29973 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.89■□□□□ 0.93
CNGA1P29973 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNGA1P29973 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNGA1P29973 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC20.89■□□□□ 0.93
CNGA1P29973 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC20.89■□□□□ 0.93
CNGA1P29973 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC20.89■□□□□ 0.93
CNGA1P29973 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.88■□□□□ 0.93
CNGA1P29973 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 SARAF-214ENST00000545648 1976 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CNGA1P29973 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
CNGA1P29973 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 IRX1P1-201ENST00000438849 1838 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 FEM1AP3-201ENST00000403722 1741 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC20.88■□□□□ 0.93
CNGA1P29973 MIR574-201ENST00000385209 96 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 FAM197Y8-203ENST00000450145 560 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 RN7SL606P-201ENST00000472779 293 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 AC091607.1-201ENST00000490318 1060 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 AP005901.3-202ENST00000581653 237 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.88■□□□□ 0.93
CNGA1P29973 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC20.88■□□□□ 0.93
CNGA1P29973 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC20.88■□□□□ 0.93
CNGA1P29973 TP73-AS1-207ENST00000624167 988 ntBASIC20.88■□□□□ 0.93
CNGA1P29973 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.88■□□□□ 0.93
CNGA1P29973 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.88■□□□□ 0.93
CNGA1P29973 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CNGA1P29973 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC20.87■□□□□ 0.93
CNGA1P29973 AL353692.3-201ENST00000407031 1396 ntBASIC20.87■□□□□ 0.93
CNGA1P29973 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CNGA1P29973 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC20.87■□□□□ 0.93
CNGA1P29973 NAT14-202ENST00000587400 416 ntTSL 5 BASIC20.87■□□□□ 0.93
CNGA1P29973 AL773604.1-201ENST00000617417 272 ntBASIC20.87■□□□□ 0.93
CNGA1P29973 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC20.87■□□□□ 0.93
CNGA1P29973 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC20.87■□□□□ 0.93
CNGA1P29973 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
CNGA1P29973 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC20.87■□□□□ 0.93
CNGA1P29973 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC20.86■□□□□ 0.93
CNGA1P29973 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.86■□□□□ 0.93
CNGA1P29973 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CNGA1P29973 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 ERCC5-207ENST00000535557 1125 ntTSL 5 BASIC20.86■□□□□ 0.93
CNGA1P29973 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.86■□□□□ 0.93
CNGA1P29973 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CNGA1P29973 TST-204ENST00000622841 1105 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
CNGA1P29973 KRT81-202ENST00000615839 1505 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
CNGA1P29973 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC20.86■□□□□ 0.93
CNGA1P29973 FP475955.4-201ENST00000623131 1990 ntBASIC20.86■□□□□ 0.93
CNGA1P29973 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC20.86■□□□□ 0.93
CNGA1P29973 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CNGA1P29973 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.86■□□□□ 0.93
CNGA1P29973 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.85■□□□□ 0.93
CNGA1P29973 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC20.85■□□□□ 0.93
CNGA1P29973 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 STX8-201ENST00000306357 1246 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
CNGA1P29973 PPIE-208ENST00000470213 927 ntTSL 3 BASIC20.85■□□□□ 0.93
CNGA1P29973 GOLGA7-203ENST00000518270 808 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
CNGA1P29973 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC20.85■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 35.1 ms