Protein–RNA interactions for Protein: P29353

SHC1, SHC-transforming protein 1, humanhuman

Predictions only

Length 583 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1P29353 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 BRMS1L-201ENST00000216807 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 FO681492.1-203ENST00000622861 1362 ntAPPRIS ALT2 TSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.86■□□□□ 0.29
SHC1P29353 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 PHB2-203ENST00000535923 1515 ntAPPRIS P2 TSL 5 BASIC16.86■□□□□ 0.29
SHC1P29353 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHC1P29353 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.85■□□□□ 0.29
SHC1P29353 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SHC1P29353 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHC1P29353 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC16.85■□□□□ 0.29
SHC1P29353 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHC1P29353 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC16.85■□□□□ 0.29
SHC1P29353 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC16.85■□□□□ 0.29
SHC1P29353 AL357033.4-201ENST00000617703 1807 ntBASIC16.85■□□□□ 0.29
SHC1P29353 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 CD70-202ENST00000423145 881 ntTSL 2 BASIC16.85■□□□□ 0.29
SHC1P29353 AL137013.1-201ENST00000432946 1228 ntBASIC16.85■□□□□ 0.29
SHC1P29353 NT5C-210ENST00000582160 860 ntTSL 2 BASIC16.85■□□□□ 0.29
SHC1P29353 MIR3180-5-201ENST00000583743 153 ntBASIC16.85■□□□□ 0.29
SHC1P29353 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC16.85■□□□□ 0.29
SHC1P29353 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.85■□□□□ 0.29
SHC1P29353 AL138966.2-201ENST00000621997 464 ntBASIC16.85■□□□□ 0.29
SHC1P29353 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC16.85■□□□□ 0.29
SHC1P29353 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
SHC1P29353 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 CD276-201ENST00000318424 2738 ntTSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 TRAF4-201ENST00000262395 2923 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SHC1P29353 Telomerase-vert.1-201ENST00000363312 438 ntBASIC16.84■□□□□ 0.29
SHC1P29353 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC16.84■□□□□ 0.29
SHC1P29353 PHB2-202ENST00000440277 996 ntTSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 AC009947.2-201ENST00000444014 672 ntBASIC16.84■□□□□ 0.29
SHC1P29353 KRT18P21-201ENST00000515767 1272 ntBASIC16.84■□□□□ 0.29
SHC1P29353 TK2-213ENST00000563369 882 ntTSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 RN7SL850P-201ENST00000579959 291 ntBASIC16.84■□□□□ 0.29
SHC1P29353 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 MFHAS1-201ENST00000276282 6414 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 FZD10-201ENST00000229030 3281 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SHC1P29353 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 TOX2-205ENST00000423191 1709 ntTSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.84■□□□□ 0.29
SHC1P29353 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 CHTOP-201ENST00000368686 2250 ntTSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
SHC1P29353 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
SHC1P29353 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
SHC1P29353 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC16.83■□□□□ 0.29
SHC1P29353 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHC1P29353 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
SHC1P29353 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHC1P29353 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
SHC1P29353 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
SHC1P29353 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
SHC1P29353 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC16.83■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms