Protein–RNA interactions for Protein: P22362

CCL1, C-C motif chemokine 1, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL1P22362 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC15.83■□□□□ 0.12
CCL1P22362 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC15.83■□□□□ 0.12
CCL1P22362 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCL1P22362 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL1P22362 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCL1P22362 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 SLC39A1-210ENST00000617697 2214 ntAPPRIS P1 TSL 5 BASIC15.83■□□□□ 0.12
CCL1P22362 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 ADAMTS8-201ENST00000257359 4010 ntAPPRIS P1 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL1P22362 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC15.83■□□□□ 0.12
CCL1P22362 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC15.83■□□□□ 0.12
CCL1P22362 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 PDE9A-206ENST00000380328 1875 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 LGI4-201ENST00000310123 2814 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCL1P22362 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCL1P22362 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC15.82■□□□□ 0.12
CCL1P22362 AC007663.1-201ENST00000438948 1240 ntBASIC15.82■□□□□ 0.12
CCL1P22362 PACRGL-207ENST00000502938 810 ntTSL 4 BASIC15.82■□□□□ 0.12
CCL1P22362 AC008550.1-201ENST00000511500 884 ntBASIC15.82■□□□□ 0.12
CCL1P22362 DHDH-203ENST00000522614 776 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 OVCH1-AS1-203ENST00000551108 963 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL1P22362 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 AP000525.1-201ENST00000608286 694 ntBASIC15.82■□□□□ 0.12
CCL1P22362 AC116562.4-202ENST00000641738 218 ntBASIC15.82■□□□□ 0.12
CCL1P22362 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL1P22362 AP001273.2-201ENST00000638767 2993 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 ASL-204ENST00000395331 1538 ntTSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
CCL1P22362 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC15.82■□□□□ 0.12
CCL1P22362 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC15.82■□□□□ 0.12
CCL1P22362 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC15.82■□□□□ 0.12
CCL1P22362 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC15.82■□□□□ 0.12
CCL1P22362 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCL1P22362 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
CCL1P22362 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCL1P22362 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
CCL1P22362 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 HDAC10-202ENST00000349505 1950 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL1P22362 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 KIRREL3-AS3-201ENST00000404882 831 ntBASIC15.81■□□□□ 0.12
CCL1P22362 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC15.81■□□□□ 0.12
CCL1P22362 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC15.81■□□□□ 0.12
CCL1P22362 ETFA-216ENST00000560726 942 ntTSL 3 BASIC15.81■□□□□ 0.12
CCL1P22362 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC15.81■□□□□ 0.12
CCL1P22362 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 AC010653.2-201ENST00000623505 997 ntBASIC15.81■□□□□ 0.12
CCL1P22362 LINC01126-201ENST00000623515 1646 ntBASIC15.81■□□□□ 0.12
CCL1P22362 AC112497.1-201ENST00000624824 639 ntBASIC15.81■□□□□ 0.12
CCL1P22362 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC15.81■□□□□ 0.12
CCL1P22362 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
CCL1P22362 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
CCL1P22362 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
CCL1P22362 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL1P22362 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
CCL1P22362 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL1P22362 SP100-208ENST00000427101 1922 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL1P22362 SSX2IP-210ENST00000605755 1933 ntTSL 2 BASIC15.8■□□□□ 0.12
CCL1P22362 AL024508.2-201ENST00000607749 1894 ntBASIC15.8■□□□□ 0.12
CCL1P22362 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC15.8■□□□□ 0.12
CCL1P22362 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
CCL1P22362 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC15.8■□□□□ 0.12
CCL1P22362 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
CCL1P22362 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms