Protein–RNA interactions for Protein: P20020

ATP2B1, Plasma membrane calcium-transporting ATPase 1, humanhuman

Predictions only

Length 1,258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B1P20020 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
ATP2B1P20020 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
ATP2B1P20020 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATP2B1P20020 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATP2B1P20020 PLA2G2F-201ENST00000375102 2723 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 PTPA-201ENST00000337738 2845 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2B1P20020 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC21.17■□□□□ 0.98
ATP2B1P20020 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC21.17■□□□□ 0.98
ATP2B1P20020 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 KRT18P23-201ENST00000435622 1283 ntBASIC21.17■□□□□ 0.98
ATP2B1P20020 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC21.17■□□□□ 0.98
ATP2B1P20020 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 CLN6-221ENST00000637494 765 ntTSL 5 BASIC21.17■□□□□ 0.98
ATP2B1P20020 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 KRT8P50-201ENST00000562022 1438 ntBASIC21.17■□□□□ 0.98
ATP2B1P20020 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC21.17■□□□□ 0.98
ATP2B1P20020 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
ATP2B1P20020 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 DMRT3-201ENST00000190165 2183 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 KRT18P22-201ENST00000402024 1347 ntBASIC21.16■□□□□ 0.98
ATP2B1P20020 ILF2-202ENST00000368681 726 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 DUT-205ENST00000558813 769 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC21.16■□□□□ 0.98
ATP2B1P20020 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC21.16■□□□□ 0.98
ATP2B1P20020 AC008764.1-201ENST00000409035 2567 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
ATP2B1P20020 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC21.16■□□□□ 0.98
ATP2B1P20020 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2B1P20020 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2B1P20020 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2B1P20020 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC21.15■□□□□ 0.98
ATP2B1P20020 ECEL1P3-201ENST00000427961 737 ntBASIC21.15■□□□□ 0.98
ATP2B1P20020 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 PHB2-202ENST00000440277 996 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2B1P20020 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC21.15■□□□□ 0.98
ATP2B1P20020 AC009947.2-201ENST00000444014 672 ntBASIC21.15■□□□□ 0.98
ATP2B1P20020 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2B1P20020 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ATP2B1P20020 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2B1P20020 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.15■□□□□ 0.98
ATP2B1P20020 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2B1P20020 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 SCD5-201ENST00000273908 1995 ntTSL 2 BASIC21.15■□□□□ 0.98
ATP2B1P20020 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC21.15■□□□□ 0.98
ATP2B1P20020 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
ATP2B1P20020 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC21.15■□□□□ 0.98
ATP2B1P20020 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC21.14■□□□□ 0.98
ATP2B1P20020 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.14■□□□□ 0.98
ATP2B1P20020 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2B1P20020 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2B1P20020 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2B1P20020 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC21.14■□□□□ 0.98
ATP2B1P20020 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2B1P20020 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC21.14■□□□□ 0.98
ATP2B1P20020 VLDLR-AS1-205ENST00000599229 1346 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 Telomerase-vert.1-201ENST00000363312 438 ntBASIC21.14■□□□□ 0.97
ATP2B1P20020 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP2B1P20020 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC21.14■□□□□ 0.97
ATP2B1P20020 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.14■□□□□ 0.97
ATP2B1P20020 WWOX-216ENST00000569818 525 ntBASIC21.14■□□□□ 0.97
ATP2B1P20020 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP2B1P20020 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP2B1P20020 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC21.14■□□□□ 0.97
ATP2B1P20020 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.97
ATP2B1P20020 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
ATP2B1P20020 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms