Protein–RNA interactions for Protein: P19838

NFKB1, Nuclear factor NF-kappa-B p105 subunit, humanhuman

Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1P19838 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
NFKB1P19838 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
NFKB1P19838 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKB1P19838 ZNF419-207ENST00000442920 1857 ntAPPRIS ALT2 TSL 2 BASIC18.71■□□□□ 0.59
NFKB1P19838 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.71■□□□□ 0.59
NFKB1P19838 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
NFKB1P19838 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.71■□□□□ 0.58
NFKB1P19838 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKB1P19838 TAX1BP3-201ENST00000225525 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKB1P19838 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKB1P19838 AC018470.1-201ENST00000624790 3129 ntBASIC18.7■□□□□ 0.58
NFKB1P19838 AC142086.1-202ENST00000398669 1839 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKB1P19838 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 CD276-201ENST00000318424 2738 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKB1P19838 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC18.7■□□□□ 0.58
NFKB1P19838 GMCL1P1-201ENST00000463439 1581 ntBASIC18.7■□□□□ 0.58
NFKB1P19838 SEC1P-202ENST00000473944 940 ntBASIC18.7■□□□□ 0.58
NFKB1P19838 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKB1P19838 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC18.7■□□□□ 0.58
NFKB1P19838 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC18.7■□□□□ 0.58
NFKB1P19838 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.7■□□□□ 0.58
NFKB1P19838 ETFA-216ENST00000560726 942 ntTSL 3 BASIC18.7■□□□□ 0.58
NFKB1P19838 AC002094.1-201ENST00000591482 1050 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKB1P19838 AC010240.3-201ENST00000607688 395 ntBASIC18.7■□□□□ 0.58
NFKB1P19838 ST20-MTHFS-203ENST00000615374 679 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
NFKB1P19838 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKB1P19838 OBP2B-205ENST00000618116 961 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKB1P19838 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKB1P19838 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 CCDC3-201ENST00000378825 2731 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.7■□□□□ 0.58
NFKB1P19838 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.7■□□□□ 0.58
NFKB1P19838 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
NFKB1P19838 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.69■□□□□ 0.58
NFKB1P19838 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC18.69■□□□□ 0.58
NFKB1P19838 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC18.69■□□□□ 0.58
NFKB1P19838 PDE9A-213ENST00000398236 1776 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 RHOC-204ENST00000369633 1295 ntAPPRIS P1 TSL 3 BASIC18.69■□□□□ 0.58
NFKB1P19838 GAD2-202ENST00000376248 680 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 EHMT1-211ENST00000482340 691 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC18.69■□□□□ 0.58
NFKB1P19838 AC009477.2-201ENST00000635976 171 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
NFKB1P19838 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 GUCY1A2-201ENST00000282249 3047 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 BTBD1-202ENST00000379403 1467 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
NFKB1P19838 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.69■□□□□ 0.58
NFKB1P19838 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
NFKB1P19838 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
NFKB1P19838 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC18.68■□□□□ 0.58
NFKB1P19838 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 SEMA3B-202ENST00000418576 1765 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 NOC2LP1-202ENST00000452600 2235 ntBASIC18.68■□□□□ 0.58
NFKB1P19838 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
NFKB1P19838 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC18.68■□□□□ 0.58
NFKB1P19838 NEK4P2-201ENST00000580004 1012 ntBASIC18.68■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms